RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 DSEQ9UL01 958 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 COG5Q9UP83 839 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 SSUH2Q9Y2M2 353 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 COL6A3P12111 3177 aa9.88□□□□□ -0.83
NUP54-207ENST00000508583 ANK1P16157 1881 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 H7C4K7 107 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 BIN1O00499 593 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 IKBKBO14920 756 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 SLC34A2O95436 690 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 GNA14O95837 355 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 ODC1P11926 461 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 TAF6P49848 677 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 ERVFC1P60507 584 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 RBP5P82980 135 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 SOX4Q06945 474 aaPredicted RBP9.87□□□□□ -0.83
NUP54-207ENST00000508583 SPAG1Q07617 926 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 AAK1Q2M2I8 961 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 SV2CQ496J9 727 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 ZCWPW2Q504Y3 356 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 TCEAL5Q5H9L2 206 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 FAM171A1Q5VUB5 890 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 C9orf57Q5W0N0 161 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 FAM186BQ8IYM0 893 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 RNF168Q8IYW5 571 aaPredicted RBP9.87□□□□□ -0.83
NUP54-207ENST00000508583 LRRC52Q8N7C0 313 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 TMC2Q8TDI7 906 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 HASPINQ8TF76 798 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 CCDC127Q96BQ5 260 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 SUSD3Q96L08 255 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 CEP63Q96MT8 703 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 CGRRF1Q99675 332 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 MTMR12Q9C0I1 747 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 GOLGA2P5Q9HBQ8 144 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 METTL14Q9HCE5 456 aaKnown RBP9.87□□□□□ -0.83
NUP54-207ENST00000508583 PDE11AQ9HCR9 933 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 CHST7Q9NS84 486 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 INTS13Q9NVM9 706 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 FNIP2Q9P278 1114 aa9.87□□□□□ -0.83
NUP54-207ENST00000508583 ANO9A1A5B4 782 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 C2orf71A6NGG8 1288 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 PIRO00625 290 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 MEFVO15553 781 aaPredicted RBP9.86□□□□□ -0.83
NUP54-207ENST00000508583 PHACTR2O75167 634 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 LETM1O95202 739 aaPredicted RBP9.86□□□□□ -0.83
NUP54-207ENST00000508583 EFEMP2O95967 443 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 KRT19P08727 400 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 ATXN8OSP0DMR3 200 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 FGFR3P22607 806 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 DNAJB1P25685 340 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 AARSP49588 968 aaKnown RBP eCLIP9.86□□□□□ -0.83
NUP54-207ENST00000508583 NDUFV1P49821 464 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 VAMP7P51809 220 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CLDN10P78369 228 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 TRPC3Q13507 836 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CAMK1Q14012 370 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 PTPN14Q15678 1187 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CCDC85BQ15834 202 aaPredicted RBP9.86□□□□□ -0.83
NUP54-207ENST00000508583 SKOR2Q2VWA4 1001 aaPredicted RBP9.86□□□□□ -0.83
NUP54-207ENST00000508583 ISM2Q6H9L7 571 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 KLHL10Q6JEL2 608 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 SASS6Q6UVJ0 657 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 DSTYKQ6XUX3 929 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 METTL23Q86XA0 190 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CEP57Q86XR8 500 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 EFCAB13Q8IY85 973 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CSGALNACT2Q8N6G5 542 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 EFHBQ8N7U6 833 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CCDC150Q8NCX0 1101 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 SPATA18Q8TC71 538 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 GPT2Q8TD30 523 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 PARD3BQ8TEW8 1205 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 BCL7CQ8WUZ0 217 aaPredicted RBP9.86□□□□□ -0.83
NUP54-207ENST00000508583 NELFBQ8WX92 580 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 PPM1EQ8WY54 764 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 RIN2Q8WYP3 895 aaPredicted RBP9.86□□□□□ -0.83
NUP54-207ENST00000508583 PIK3R5Q8WYR1 880 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CASP10Q92851 521 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 HLA-CQ95604 372 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 PABPC5Q96DU9 382 aaKnown RBP9.86□□□□□ -0.83
NUP54-207ENST00000508583 PAAF1Q9BRP4 392 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 GPR62Q9BZJ7 368 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 IMPG2Q9BZV3 1241 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CXCL16Q9H2A7 254 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 RWDD2AQ9UIY3 292 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 PCDHB8Q9UN66 801 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 CTNND2Q9UQB3 1225 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 FAM50BQ9Y247 325 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 MYO7AQ13402 2215 aa9.86□□□□□ -0.83
NUP54-207ENST00000508583 SPDYE4A6NLX3 237 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 M0QZQ0 153 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 C2CD2LO14523 706 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 AKAP3O75969 853 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 ITGB3P05106 788 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 P4HA1P13674 534 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 PRKCSHP14314 528 aaPredicted RBP9.85□□□□□ -0.83
NUP54-207ENST00000508583 HOXB8P17481 243 aaPredicted RBP9.85□□□□□ -0.83
NUP54-207ENST00000508583 TYMPP19971 482 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 KLRC2P26717 231 aa9.85□□□□□ -0.83
NUP54-207ENST00000508583 ERCC5P28715 1186 aaPredicted RBP9.85□□□□□ -0.83
NUP54-207ENST00000508583 POLR2BP30876 1174 aaKnown RBP9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms