RNA–Protein interactions for RNA: ENST00000508167.5

PROM1-207, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PROM1, Length 4,014 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-207ENST00000508167 TRIM21P19474 475 aaKnown RBP11.83□□□□□ -0.52
PROM1-207ENST00000508167 CA8P35219 290 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 CACNA2D4Q7Z3S7 1137 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 ECHDC2Q86YB7 292 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 LMO3Q8TAP4 145 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 FAM84AQ96KN4 292 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 FAM207AQ9NSI2 230 aaPredicted RBP11.83□□□□□ -0.52
PROM1-207ENST00000508167 AIPL1Q9NZN9 384 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 FGFR1P11362 822 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 ITGB8P26012 769 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 USP8P40818 1118 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 PLA2G4AP47712 749 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 SCNN1GP51170 649 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 ENOX2Q16206 610 aaKnown RBP11.83□□□□□ -0.52
PROM1-207ENST00000508167 TSR1Q2NL82 804 aaKnown RBP11.83□□□□□ -0.52
PROM1-207ENST00000508167 ARHGAP29Q52LW3 1261 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 NOA1Q8NC60 698 aaKnown RBP11.83□□□□□ -0.52
PROM1-207ENST00000508167 ANK1P16157 1881 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 ABHD14A-ACY1A0A1B0GW23 586 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 N4BP1O75113 896 aaKnown RBP11.83□□□□□ -0.52
PROM1-207ENST00000508167 THP07101 528 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 MTMR12Q9C0I1 747 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 HAPLN2Q9GZV7 340 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 CEP72Q9P209 647 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 SLC4A7Q9Y6M7 1214 aa11.83□□□□□ -0.52
PROM1-207ENST00000508167 HOXA2O43364 376 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 PFKMP08237 780 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 JADE1Q6IE81 842 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 PSRC1Q6PGN9 363 aaPredicted RBP11.82□□□□□ -0.52
PROM1-207ENST00000508167 HAUS4Q9H6D7 363 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 PTPRHQ9HD43 1115 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 UBN1Q9NPG3 1134 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 CPSF3Q9UKF6 684 aaKnown RBP11.82□□□□□ -0.52
PROM1-207ENST00000508167 EFCAB14O75071 495 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 VAV2P52735 878 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 DLG4P78352 724 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 GBP6Q6ZN66 633 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 PARD3BQ8TEW8 1205 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 IQCDQ96DY2 449 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 MMS19Q96T76 1030 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 UBE2OQ9C0C9 1292 aaKnown RBP11.82□□□□□ -0.52
PROM1-207ENST00000508167 CSPG5O95196 566 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 EIF4A3P38919 411 aaKnown RBP11.82□□□□□ -0.52
PROM1-207ENST00000508167 KIF11P52732 1056 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 EXOC3L4Q17RC7 722 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 SLC10A6Q3KNW5 377 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 KRT39Q6A163 491 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 CD302Q8IX05 232 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 PLEKHO2Q8TD55 490 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 TSPYL2Q9H2G4 693 aaPredicted RBP11.82□□□□□ -0.52
PROM1-207ENST00000508167 ASB7Q9H672 318 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 PLCB1Q9NQ66 1216 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 RGS18Q9NS28 235 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 NXF1Q9UBU9 619 aaKnown RBP11.82□□□□□ -0.52
PROM1-207ENST00000508167 STYXL1Q9Y6J8 313 aa11.82□□□□□ -0.52
PROM1-207ENST00000508167 MEIS3P2A8K0S8 358 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 NRDCO43847 1150 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 NFICP08651 508 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 PON1P27169 355 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 GUCY2FP51841 1108 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 PSMD6Q15008 389 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 LIN28BQ6ZN17 250 aaKnown RBP eCLIP11.81□□□□□ -0.52
PROM1-207ENST00000508167 NEK11Q8NG66 645 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 PARD6BQ9BYG5 372 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 SLC38A7Q9NVC3 462 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 GCNT4Q9P109 453 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 FBXL5Q9UKA1 691 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 UBQLN1Q9UMX0 589 aaKnown RBP11.81□□□□□ -0.52
PROM1-207ENST00000508167 AGAP1Q9UPQ3 857 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 GIT1Q9Y2X7 761 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 PRG3Q9Y2Y8 225 aaPredicted RBP11.81□□□□□ -0.52
PROM1-207ENST00000508167 CASTOR2A6NHX0 329 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 ZC3H11AO75152 810 aaKnown RBP eCLIP11.81□□□□□ -0.52
PROM1-207ENST00000508167 OR1G1P47890 313 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 RAPGEF1Q13905 1077 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 BTG3Q14201 252 aaPredicted RBP11.81□□□□□ -0.52
PROM1-207ENST00000508167 UBXN11Q5T124 520 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 CC2D1AQ6P1N0 951 aaPredicted RBP11.81□□□□□ -0.52
PROM1-207ENST00000508167 TMCO2Q7Z6W1 182 aaPredicted RBP11.81□□□□□ -0.52
PROM1-207ENST00000508167 RABGGTAQ92696 567 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 RNPC3Q96LT9 517 aaKnown RBP11.81□□□□□ -0.52
PROM1-207ENST00000508167 TMEM161AQ9NX61 479 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 SSU72P8A0A1W2PR75 194 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 EOMESO95936 686 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 SLC9A1P19634 815 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 PROZP22891 400 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 NOMO2Q5JPE7 1267 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 TRAF7Q6Q0C0 670 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 CREG2Q8IUH2 290 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 PPM1KQ8N3J5 372 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 SMG8Q8ND04 991 aaKnown RBP11.81□□□□□ -0.52
PROM1-207ENST00000508167 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 SPAG5Q96R06 1193 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 CGRRF1Q99675 332 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 ST7Q9NRC1 585 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 DPP3Q9NY33 737 aa11.81□□□□□ -0.52
PROM1-207ENST00000508167 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
PROM1-207ENST00000508167 LRRIQ3A6PVS8 624 aaPredicted RBP11.8□□□□□ -0.52
PROM1-207ENST00000508167 ITGB3P05106 788 aa11.8□□□□□ -0.52
PROM1-207ENST00000508167 ATF7P17544 494 aaPredicted RBP11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms