RNA–Protein interactions for RNA: ENST00000508037.1

HMGB3P16-201, Transcript of high mobility group box 3 pseudogene 16, humanhuman

BASIC

Gene HMGB3P16, Length 287 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P16-201ENST00000508037 OLIG1Q8TAK6 271 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 MGARPQ8TDB4 240 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 MICAL1Q8TDZ2 1067 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 EPS8L1Q8TE68 723 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 PIGOQ8TEQ8 1089 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 DHX38Q92620 1227 aaKnown RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 NAF1Q96HR8 494 aaKnown RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 GMCL1Q96IK5 515 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 LRRC37BQ96QE4 947 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 HSD17B14Q9BPX1 270 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 NUP85Q9BW27 656 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 PHACTR1Q9C0D0 580 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 GPR88Q9GZN0 384 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 COA1Q9GZY4 146 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 DNAJC18Q9H819 358 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ETNK1Q9HBU6 452 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 SSU72Q9NP77 194 aaKnown RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 UBE2TQ9NPD8 197 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 AVENQ9NQS1 362 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 SAR1AQ9NR31 198 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 KCNQ5Q9NR82 932 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZFATQ9P243 1243 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 DBR1Q9UK59 544 aaKnown RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 AJAP1Q9UKB5 411 aaPredicted RBP5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 COG5Q9UP83 839 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 STK38LQ9Y2H1 464 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 LRRC42Q9Y546 428 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 ZMYM2Q9UBW7 1377 aa5.28□□□□□ -1.56
HMGB3P16-201ENST00000508037 SPATA31A5Q5VU36 1347 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SPATA31A6Q5VVP1 1343 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 EMSYQ7Z589 1322 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SPATA31A7Q8IWB4 1347 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 RSPH10B2B2RC85 870 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 RASA4BC9J798 803 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 K7ENM7 598 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRAFD1O14545 582 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 PRPF4O43172 522 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 RASA4O43374 803 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 PSTPIP1O43586 416 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 GAS7O60861 476 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZC3H11AO75152 810 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 LRRN2O75325 713 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 NPTXRO95502 500 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ACSL3O95573 720 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 NR3C2P08235 984 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 GSTA2P09210 222 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 RSPH10BP0C881 870 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 BMP1P13497 986 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ACADSP16219 412 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ATP6V1C1P21283 382 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CNGA1P29973 690 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 NMT1P30419 496 aaKnown RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 MAPK4P31152 587 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SHMT1P34896 483 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 PHBP35232 272 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 COPB2P35606 906 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC16A2P36021 539 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ADCY8P40145 1251 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 MXI1P50539 228 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ITGA8P53708 1063 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 MCCD1P59942 119 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CDR2Q01850 454 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CYP4A11Q02928 519 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 IKQ13123 557 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 PICALMQ13492 652 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 GRIK5Q16478 980 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CCNG2Q16589 344 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SGSM1Q2NKQ1 1148 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 C11orf91Q3C1V1 193 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CBWD6Q4V339 395 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC45A4Q5BKX6 768 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CBWD3Q5JTY5 395 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CBWD5Q5RIA9 395 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SYDE2Q5VT97 1194 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CDCA2Q69YH5 1023 aaPredicted RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ACAD10Q6JQN1 1059 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 PHLDB3Q6NSJ2 640 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 TTC27Q6P3X3 843 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 TRIM72Q6ZMU5 477 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 TMEM179Q6ZVK1 233 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZCCHC9Q8N567 271 aaKnown RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 FITM2Q8N6M3 262 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ENDOVQ8N8Q3 282 aaKnown RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 XXYLT1Q8NBI6 393 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 LMO3Q8TAP4 145 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 UHMK1Q8TAS1 419 aaKnown RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 GDAP1Q8TB36 358 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 LRRC8CQ8TDW0 803 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 STK32AQ8WU08 396 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 KRT35Q92764 455 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SLC5A5Q92911 643 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 TEKT1Q969V4 418 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 LENG9Q96B70 501 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ALKBH8Q96BT7 664 aaKnown RBP5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 ZNF570Q96NI8 536 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 NT5C1BQ96P26 610 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 CRAMP1Q96RY5 1269 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 SMC6Q96SB8 1091 aa5.27□□□□□ -1.57
HMGB3P16-201ENST00000508037 RIT2Q99578 217 aa5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms