RNA–Protein interactions for RNA: ENST00000507046.5

DDR1-259, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-259ENST00000507046 DPP3Q9NY33 737 aa21.51■■□□□ 1.03
DDR1-259ENST00000507046 FNIP2Q9P278 1114 aa21.51■■□□□ 1.03
DDR1-259ENST00000507046 CD207Q9UJ71 328 aa21.51■■□□□ 1.03
DDR1-259ENST00000507046 FAM50BQ9Y247 325 aa21.51■■□□□ 1.03
DDR1-259ENST00000507046 PCDHA5Q9Y5H7 936 aa21.51■■□□□ 1.03
DDR1-259ENST00000507046 EXOC3O60645 756 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 PAX3P23760 479 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 IGFBP6P24592 240 aaPredicted RBP21.5■■□□□ 1.03
DDR1-259ENST00000507046 TKTP29401 623 aaKnown RBP21.5■■□□□ 1.03
DDR1-259ENST00000507046 C9orf57Q5W0N0 161 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 ELMSAN1Q6PJG2 1045 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 ANKS3Q6ZW76 656 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 SUSD3Q96L08 255 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 PDE11AQ9HCR9 933 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 DZANK1Q9NVP4 752 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 CLEC1BQ9P126 229 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 MAPK8IP1Q9UQF2 711 aa21.5■■□□□ 1.03
DDR1-259ENST00000507046 SPDYE4A6NLX3 237 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 GLUD1P00367 558 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 TMEM191BP0C7N4 346 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 HOXB8P17481 243 aaPredicted RBP21.49■■□□□ 1.03
DDR1-259ENST00000507046 CLCN4P51793 760 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 WNT7BP56706 349 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 CLUL1Q15846 466 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 ZNF658Q5TYW1 1059 aaPredicted RBP21.49■■□□□ 1.03
DDR1-259ENST00000507046 ANKRD54Q6NXT1 300 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 TMEM130Q8N3G9 435 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 RDH13Q8NBN7 331 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 SPATA20Q8TB22 786 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 LNX1Q8TBB1 728 aaPredicted RBP21.49■■□□□ 1.03
DDR1-259ENST00000507046 SLC22A17Q8WUG5 538 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 ANKRD36BP1Q96IX9 119 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 MSLNLQ96KJ4 702 aa21.49■■□□□ 1.03
DDR1-259ENST00000507046 BRWD1Q9NSI6 2320 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 ANO9A1A5B4 782 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 NR3C1P04150 777 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 EPCAMP16422 314 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 SMAD4Q13485 552 aaKnown RBP21.48■■□□□ 1.03
DDR1-259ENST00000507046 PTCRAQ6ISU1 281 aaPredicted RBP21.48■■□□□ 1.03
DDR1-259ENST00000507046 DSTYKQ6XUX3 929 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 SLC9A9Q8IVB4 645 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 GLYCTKQ8IVS8 523 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 APPL2Q8NEU8 664 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 GADD45GIP1Q8TAE8 222 aaPredicted RBP21.48■■□□□ 1.03
DDR1-259ENST00000507046 TMEM174Q8WUU8 243 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 ERCC4Q92889 916 aaPredicted RBP21.48■■□□□ 1.03
DDR1-259ENST00000507046 ZNF560Q96MR9 790 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 FNBP1Q96RU3 617 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 DPP7Q9UHL4 492 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 PCDHB8Q9UN66 801 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 TRAF3IP3Q9Y228 551 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 VWA8A3KMH1 1905 aa21.48■■□□□ 1.03
DDR1-259ENST00000507046 ARHGEF37A1IGU5 675 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 H7C4K7 107 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 PIRO00625 290 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 PPEF2O14830 753 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 RPL17P18621 184 aaKnown RBP21.47■■□□□ 1.03
DDR1-259ENST00000507046 AARSP49588 968 aaKnown RBP eCLIP21.47■■□□□ 1.03
DDR1-259ENST00000507046 CYP24A1Q07973 514 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 MYBPC2Q14324 1141 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 PSMD6Q15008 389 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 WDR49Q8IV35 697 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 SMYD4Q8IYR2 804 aaPredicted RBP21.47■■□□□ 1.03
DDR1-259ENST00000507046 SMRP1Q8NCR6 262 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 MTRRQ9UBK8 725 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 ITGA11Q9UKX5 1188 aa21.47■■□□□ 1.03
DDR1-259ENST00000507046 R3HCC1Q9Y3T6 440 aaKnown RBP21.47■■□□□ 1.03
DDR1-259ENST00000507046 GOLGA6L22H0YM25 854 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 M0QZQ0 153 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 C1RP00736 705 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 TNNC2P02585 160 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 ITGB3P05106 788 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 DLATP10515 647 aaKnown RBP21.46■■□□□ 1.03
DDR1-259ENST00000507046 PNPLA4P41247 253 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 TAF6P49848 677 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 LILRA4P59901 499 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 COBLL1Q53SF7 1204 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 VARS2Q5ST30 1063 aaKnown RBP21.46■■□□□ 1.03
DDR1-259ENST00000507046 ZNF280DQ6N043 979 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 CGRRF1Q99675 332 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 MTMR12Q9C0I1 747 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 INTS13Q9NVM9 706 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 DMAC2Q9NW81 257 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 FRMD4BQ9Y2L6 1034 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 BACE2Q9Y5Z0 518 aa21.46■■□□□ 1.03
DDR1-259ENST00000507046 GRXCR2A6NFK2 248 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 MBTPS2O43462 519 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 ODC1P11926 461 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 BMP1P13497 986 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 TNNI1P19237 187 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 NR2F2P24468 414 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 RPL13P26373 211 aaKnown RBP21.45■■□□□ 1.02
DDR1-259ENST00000507046 POLR2BP30876 1174 aaKnown RBP21.45■■□□□ 1.02
DDR1-259ENST00000507046 STIM1Q13586 685 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 NFIL3Q16649 462 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 DUOXA2Q1HG44 320 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 SV2CQ496J9 727 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 LMBRD2Q68DH5 695 aaPredicted RBP21.45■■□□□ 1.02
DDR1-259ENST00000507046 USP37Q86T82 979 aa21.45■■□□□ 1.02
DDR1-259ENST00000507046 PALB2Q86YC2 1186 aa21.45■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 71.1 ms