RNA–Protein interactions for RNA: ENST00000506858.2

SCAMP1-202, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 1 (best)

Gene SCAMP1, Length 1,603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-202ENST00000506858 PI4K2AQ9BTU6 479 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 RBSNQ9H1K0 784 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 VPS16Q9H269 839 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 ASB7Q9H672 318 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 ALG13Q9NP73 1137 aaKnown RBP9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 MARCH5Q9NX47 278 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 MSRAQ9UJ68 235 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 AGAP1Q9UPQ3 857 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 PCDHGC5Q9Y5F6 944 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 ANK1P16157 1881 aa9.55□□□□□ -0.88
SCAMP1-202ENST00000506858 KCNJ18B7U540 433 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 PODXLO00592 558 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 B3GAT3O94766 335 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 KIF4AO95239 1232 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 VNN1O95497 513 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 C4BPAP04003 597 aaKnown RBP9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 ALDH2P05091 517 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 TMEM191BP0C7N4 346 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 CTNNB1P35222 781 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 APBA1Q02410 837 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 BIRC3Q13489 604 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 KCNJ12Q14500 433 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 DUOXA2Q1HG44 320 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 C9orf57Q5W0N0 161 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 PPP2R2DQ66LE6 453 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 SPOPLQ6IQ16 392 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 INTS8Q75QN2 995 aaKnown RBP9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 FRMD5Q7Z6J6 570 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 TRIM59Q8IWR1 403 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 KLHL23Q8NBE8 558 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 CXorf38Q8TB03 319 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 TMEM174Q8WUU8 243 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 PTCD2Q8WV60 388 aaKnown RBP9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 AUTS2Q8WXX7 1259 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 SEMA4DQ92854 862 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 SLC35C1Q96A29 364 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 CRACR2AQ9BSW2 395 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 VN1R3Q9BXE9 311 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 NAT10Q9H0A0 1025 aaKnown RBP9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 THAP9Q9H5L6 903 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 KANSL3Q9P2N6 904 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 UBQLN1Q9UMX0 589 aaKnown RBP9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 FAN1Q9Y2M0 1017 aa9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 TIMM13Q9Y5L4 95 aaPredicted RBP9.54□□□□□ -0.88
SCAMP1-202ENST00000506858 BECN2A8MW95 431 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 PES1O00541 588 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 SLC16A3O15427 465 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 PHACTR2O75167 634 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 CLSTN1O94985 981 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 PRKCSHP14314 528 aaPredicted RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 CDK11BP21127 795 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 DNAJB1P25685 340 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 BMPR1AP36894 532 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 ALDH7A1P49419 539 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 MYL6P60660 151 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 KCNH2Q12809 1159 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 LRMPQ12912 555 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 KRT31Q15323 416 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 UPP1Q16831 310 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 EPC2Q52LR7 807 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 TCP11X2Q5H9J9 407 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 CDKAL1Q5VV42 579 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 Q7L0L9 218 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 WDR49Q8IV35 697 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 BEST2Q8NFU1 509 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 TAS1R2Q8TE23 839 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 ZNF558Q96NG5 402 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 MKNK1Q9BUB5 465 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 MRPL9Q9BYD2 267 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 GPR62Q9BZJ7 368 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 TTYH1Q9H313 450 aaPredicted RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 SLC28A3Q9HAS3 691 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 MAGEC2Q9UBF1 373 aaPredicted RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 POLIQ9UNA4 740 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 C2CD2Q9Y426 696 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 SCN1AP35498 2009 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 REV3LO60673 3130 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 TDRD15B5MCY1 1934 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 PIRO00625 290 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 MAPK13O15264 365 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 GRM6O15303 877 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 TADA2AO75478 443 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 FGFR1OPO95684 399 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 HLA-DRAP01903 254 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 TNNC2P02585 160 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 ZNF18P17022 549 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 SMAD3P84022 425 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 HSP90AA2PQ14568 343 aaPredicted RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 RAB30Q15771 203 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 LRIT3Q3SXY7 679 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 TIGD5Q53EQ6 642 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 CT47A1Q5JQC4 288 aaPredicted RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 PPP1R15BQ5SWA1 713 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 FOXR2Q6PJQ5 311 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 CD302Q8IX05 232 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 SLC39A11Q8N1S5 342 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 FAM200AQ8TCP9 573 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 GDPD5Q8WTR4 605 aa9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 CACTINQ8WUQ7 758 aaKnown RBP9.53□□□□□ -0.88
SCAMP1-202ENST00000506858 CLP1Q92989 425 aaKnown RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms