RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 GOLGA5Q8TBA6 731 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 SUSD3Q96L08 255 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 GSDMAQ96QA5 445 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 DMAC2Q9NW81 257 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 SSX2IPQ9Y2D8 614 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 NUB1Q9Y5A7 615 aa19.76■□□□□ 0.75
PDLIM7-216ENST00000506537 SCN1AP35498 2009 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 ZNF233A6NK53 670 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 PIRO00625 290 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 PDXKO00764 312 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 SMC2O95347 1197 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 KLRC2P26717 231 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 MCM4P33991 863 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 AARSP49588 968 aaKnown RBP eCLIP19.75■□□□□ 0.754e-9■■□□□ 11.9
PDLIM7-216ENST00000506537 CLCN4P51793 760 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 TFAMQ00059 246 aaKnown RBP19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 PSMD5Q16401 504 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 AAK1Q2M2I8 961 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 LMBRD2Q68DH5 695 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 SCARA3Q6AZY7 606 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 NT5DC4Q86YG4 428 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 RDH13Q8NBN7 331 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 SMARCE1Q969G3 411 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 GZF1Q9H116 711 aaPredicted RBP19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 KIAA1586Q9HCI6 787 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 RMND1Q9NWS8 449 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 DPP3Q9NY33 737 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 FNIP2Q9P278 1114 aa19.75■□□□□ 0.75
PDLIM7-216ENST00000506537 TSC2P49815 1807 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 SPTLC1O15269 473 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 ADAM12O43184 909 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 TRAPPC3O43617 180 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 NR3C1P04150 777 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 BMP1P13497 986 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 CYP24A1Q07973 514 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 ZCWPW2Q504Y3 356 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 TJAP1Q5JTD0 557 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 ZNF658Q5TYW1 1059 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 ANKRD54Q6NXT1 300 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 SYCE2Q6PIF2 218 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 RSPO2Q6UXX9 243 aaPredicted RBP19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 SLC9A9Q8IVB4 645 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 GLYCTKQ8IVS8 523 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 C1orf127Q8N9H9 656 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 CXorf38Q8TB03 319 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 TMEM174Q8WUU8 243 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 CASP10Q92851 521 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 CLSTN3Q9BQT9 956 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 MTMR12Q9C0I1 747 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 CD207Q9UJ71 328 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 HOOK1Q9UJC3 728 aaKnown RBP19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 TRAF3IP3Q9Y228 551 aa19.74■□□□□ 0.75
PDLIM7-216ENST00000506537 GRXCR2A6NFK2 248 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 M0QZQ0 153 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 TULP1O00294 542 aaPredicted RBP19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 EXOC3O60645 756 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 KIF20AO95235 890 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 ADH1AP07327 375 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 LILRA4P59901 499 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 PPFIBP1Q86W92 1011 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 SMRP1Q8NCR6 262 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 OR5B17Q8NGF7 314 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 FEZF2Q8TBJ5 459 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 PLEKHO2Q8TD55 490 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 LMBRD1Q9NUN5 540 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 MTRRQ9UBK8 725 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 MAN1B1Q9UKM7 699 aa19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 TCF20Q9UGU0 1960 aaKnown RBP19.73■□□□□ 0.75
PDLIM7-216ENST00000506537 SYN3O14994 580 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 MBTPS2O43462 519 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 SRGAP2BP0DMP2 458 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 IL9P15248 144 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 PRCPP42785 496 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 CASP4P49662 377 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 CREMQ03060 361 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 PSMD6Q15008 389 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 COBLL1Q53SF7 1204 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 VARS2Q5ST30 1063 aaKnown RBP19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 PTCRAQ6ISU1 281 aaPredicted RBP19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 MFSD14AQ96MC6 490 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 S1PR5Q9H228 398 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 INTS13Q9NVM9 706 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 SIX4Q9UIU6 781 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 PCDHB8Q9UN66 801 aa19.72■□□□□ 0.75
PDLIM7-216ENST00000506537 TGM5O43548 720 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 CALUO43852 315 aaPredicted RBP19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 TBC1D4O60343 1298 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 GLUD1P00367 558 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 ITGB3P05106 788 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 BMP6P22004 513 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 POLR2BP30876 1174 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 SMAD4Q13485 552 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 MRPL58Q14197 206 aaKnown RBP19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 SURF1Q15526 300 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 NFIL3Q16649 462 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 ISM2Q6H9L7 571 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 PDXDC1Q6P996 788 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 LILRA6Q6PI73 481 aa19.71■□□□□ 0.75
PDLIM7-216ENST00000506537 ANKS3Q6ZW76 656 aa19.71■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms