RNA–Protein interactions for RNA: ENST00000506426.1

TRAPPC11-205, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-205ENST00000506426 ATP2C1P98194 919 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 APBA1Q02410 837 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 PTH1RQ03431 593 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 USP10Q14694 798 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 STARD3Q14849 445 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ELF2Q15723 593 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 PKN1Q16512 942 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ARL13BQ3SXY8 428 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 TUBB8Q3ZCM7 444 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 GAGE13Q4V321 117 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 PABPC1LQ4VXU2 614 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 SLC44A4Q53GD3 710 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZMAT1Q5H9K5 638 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 C3orf38Q5JPI3 329 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 PRAMEF14Q5SWL7 426 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 AGBL4Q5VU57 503 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF783Q6ZMS7 281 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 USP30Q70CQ3 517 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF572Q7Z3I7 529 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 PLXDC1Q8IUK5 500 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 CELF5Q8N6W0 485 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ATP11CQ8NB49 1132 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 IL17RDQ8NFM7 739 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 FBXO18Q8NFZ0 1043 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 OR5M3Q8NGP4 307 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZSCAN18Q8TBC5 510 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 MDM1Q8TC05 714 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 FNIP1Q8TF40 1166 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ATXN2LQ8WWM7 1075 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 KCNN1Q92952 543 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 NMD3Q96D46 503 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 SIGLEC10Q96LC7 697 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 P2RX7Q99572 595 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 C1orf43Q9BWL3 253 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 BRIP1Q9BX63 1249 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 KRTAP9-3Q9BYQ3 159 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 TRIM54Q9BYV2 358 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 KIAA1683Q9H0B3 1180 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 C11orf54Q9H0W9 315 aaPredicted RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 PRDM16Q9HAZ2 1276 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 GCM1Q9NP62 436 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 CASS4Q9NQ75 786 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 JADE2Q9NQC1 790 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 COL20A1Q9P218 1284 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 AFF4Q9UHB7 1163 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ANAPC4Q9UJX5 808 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 GTF2A1LQ9UNN4 478 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 RUVBL1Q9Y265 456 aaKnown RBP3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 PAXBP1Q9Y5B6 917 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 IRAK3Q9Y616 596 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 DGKBQ9Y6T7 804 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 ADCY10Q96PN6 1610 aa3.87□□□□□ -1.79
TRAPPC11-205ENST00000506426 DIP2BQ9P265 1576 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 A0A1W2PPC4 97 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 F8W8V4 182 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 BTN3A1O00481 513 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 GRM6O15303 877 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 FFAR2O15552 330 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 TLR5O60602 858 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 SASH1O94885 1247 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 RAP2AP10114 183 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ALOX15P16050 662 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 CASRP41180 1078 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 HSPA7P48741 367 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 FLT3LGP49771 235 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 RENBPP51606 427 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ADCY7P51828 1080 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 DLG4P78352 724 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 EXOSC9Q06265 439 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 GRM1Q13255 1194 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 PMS2P11Q13670 270 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 BLMHQ13867 455 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 HABP2Q14520 560 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 PUM3Q15397 648 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 MLANAQ16655 118 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 CCDC38Q502W7 563 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ALFQ53S48 1182 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 KLHDC7AQ5VTJ3 777 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 OTUD7BQ6GQQ9 843 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 TLDC1Q6P9B6 456 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 BEND5Q7L4P6 421 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 GPR155Q7Z3F1 870 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 TMEFF1Q8IYR6 380 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZDHHC14Q8IZN3 488 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 TXLNBQ8N3L3 684 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 KLHL36Q8N4N3 616 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 MYCT1Q8N699 235 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ANKRD53Q8N9V6 530 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF527Q8NB42 609 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 FBXO15Q8NCQ5 510 aaPredicted RBP3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 ZNF566Q969W8 418 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 YTHDC1Q96MU7 727 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 TTLL2Q9BWV7 592 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 DPH1Q9BZG8 443 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 MYLK2Q9H1R3 596 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 KCNK12Q9HB15 430 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 AGO4Q9HCK5 861 aaKnown RBP3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 SLAMF7Q9NQ25 335 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 STK32BQ9NY57 414 aa3.86□□□□□ -1.79
TRAPPC11-205ENST00000506426 NTMQ9P121 344 aa3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms