RNA–Protein interactions for RNA: ENST00000506163.5

SMN1-204, Transcript of survival of motor neuron 1, telomeric, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMN1, Length 1,445 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN1-204ENST00000506163 PALB2Q86YC2 1186 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 GPD1LQ8N335 351 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 TMEM87AQ8NBN3 555 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 CASP10Q92851 521 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 SUSD3Q96L08 255 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 KCTD10Q9H3F6 313 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 PDE11AQ9HCR9 933 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 CD320Q9NPF0 282 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 RBAKQ9NYW8 714 aaPredicted RBP19.34■□□□□ 0.69
SMN1-204ENST00000506163 C2CD2Q9Y426 696 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 USP15Q9Y4E8 981 aaPredicted RBP19.34■□□□□ 0.69
SMN1-204ENST00000506163 PIRO00625 290 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 LDHAP00338 332 aaKnown RBP19.34■□□□□ 0.69
SMN1-204ENST00000506163 C9orf57Q5W0N0 161 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 NOC3LQ8WTT2 800 aaKnown RBP19.34■□□□□ 0.69
SMN1-204ENST00000506163 SUSD6Q92537 303 aa19.34■□□□□ 0.69
SMN1-204ENST00000506163 TGM5O43548 720 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 IL18RAPO95256 599 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 ADH1AP07327 375 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 AARSP49588 968 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMN1-204ENST00000506163 CYP2J2P51589 502 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 MRPL58Q14197 206 aaKnown RBP19.33■□□□□ 0.68
SMN1-204ENST00000506163 KCNB1Q14721 858 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 PSMD5Q16401 504 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 PUS10Q3MIT2 529 aaKnown RBP19.33■□□□□ 0.68
SMN1-204ENST00000506163 PPFIBP1Q86W92 1011 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 BEST2Q8NFU1 509 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 CXorf38Q8TB03 319 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 UHRF1Q96T88 793 aaPredicted RBP19.33■□□□□ 0.68
SMN1-204ENST00000506163 GZF1Q9H116 711 aaPredicted RBP19.33■□□□□ 0.68
SMN1-204ENST00000506163 TSHZ2Q9NRE2 1034 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP19.33■□□□□ 0.68
SMN1-204ENST00000506163 DPP3Q9NY33 737 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 MAPK8IP1Q9UQF2 711 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 NUB1Q9Y5A7 615 aa19.33■□□□□ 0.68
SMN1-204ENST00000506163 PTPRJQ12913 1337 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 M0QZQ0 153 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 DLL1O00548 723 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 KIAA0391O15091 583 aaKnown RBP19.32■□□□□ 0.68
SMN1-204ENST00000506163 TRAPPC3O43617 180 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 TBC1D4O60343 1298 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 WEE2P0C1S8 567 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 HOXB8P17481 243 aaPredicted RBP19.32■□□□□ 0.68
SMN1-204ENST00000506163 MCM4P33991 863 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 LILRA4P59901 499 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 VARS2Q5ST30 1063 aaKnown RBP19.32■□□□□ 0.68
SMN1-204ENST00000506163 LMBRD2Q68DH5 695 aaPredicted RBP19.32■□□□□ 0.68
SMN1-204ENST00000506163 C12orf56Q8IXR9 622 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 RDH13Q8NBN7 331 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 TIGD1Q96MW7 591 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 DMAC2Q9NW81 257 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 MTRRQ9UBK8 725 aa19.32■□□□□ 0.68
SMN1-204ENST00000506163 ZNF233A6NK53 670 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 TULP1O00294 542 aaPredicted RBP19.31■□□□□ 0.68
SMN1-204ENST00000506163 XPOTO43592 962 aaKnown RBP19.31■□□□□ 0.68
SMN1-204ENST00000506163 GLUD1P00367 558 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 SRGAP2BP0DMP2 458 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 SNRPFP62306 86 aaKnown RBP19.31■□□□□ 0.68
SMN1-204ENST00000506163 TFAMQ00059 246 aaKnown RBP19.31■□□□□ 0.68
SMN1-204ENST00000506163 RARS2Q5T160 578 aaKnown RBP19.31■□□□□ 0.68
SMN1-204ENST00000506163 SMYD4Q8IYR2 804 aaPredicted RBP19.31■□□□□ 0.68
SMN1-204ENST00000506163 C1orf127Q8N9H9 656 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 OR5B17Q8NGF7 314 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 SPATA20Q8TB22 786 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 BORCS6Q96GS4 357 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 ADAM7Q9H2U9 754 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 MAN1C1Q9NR34 630 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 PCDHA5Q9Y5H7 936 aa19.31■□□□□ 0.68
SMN1-204ENST00000506163 TIMM13Q9Y5L4 95 aaPredicted RBP19.31■□□□□ 0.68
SMN1-204ENST00000506163 MTCL1Q9Y4B5 1905 aaKnown RBP19.3■□□□□ 0.68
SMN1-204ENST00000506163 BDP1A6H8Y1 2624 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 SYN3O14994 580 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 OR1D2P34982 312 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 SNRNP35Q16560 246 aaKnown RBP19.3■□□□□ 0.68
SMN1-204ENST00000506163 TMC5Q6UXY8 1006 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 HS2ST1Q7LGA3 356 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 NT5DC4Q86YG4 428 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 XXYLT1Q8NBI6 393 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 PLEKHO2Q8TD55 490 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 DZANK1Q9NVP4 752 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 PCDHB8Q9UN66 801 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 BACE2Q9Y5Z0 518 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 CDY1Q9Y6F8 540 aa19.3■□□□□ 0.68
SMN1-204ENST00000506163 RFPL2O75678 378 aa19.29■□□□□ 0.68
SMN1-204ENST00000506163 RAB33AQ14088 237 aa19.29■□□□□ 0.68
SMN1-204ENST00000506163 ANKS3Q6ZW76 656 aa19.29■□□□□ 0.68
SMN1-204ENST00000506163 SENP8Q96LD8 212 aa19.29■□□□□ 0.68
SMN1-204ENST00000506163 POP1Q99575 1024 aaKnown RBP19.29■□□□□ 0.68
SMN1-204ENST00000506163 CGNQ9P2M7 1197 aaKnown RBP19.29■□□□□ 0.68
SMN1-204ENST00000506163 SIX4Q9UIU6 781 aa19.29■□□□□ 0.68
SMN1-204ENST00000506163 GTF3C5Q9Y5Q8 519 aaPredicted RBP19.29■□□□□ 0.68
SMN1-204ENST00000506163 DOCK6Q96HP0 2047 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 PDXKO00764 312 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 PRPF40AO75400 957 aaKnown RBP19.28■□□□□ 0.68
SMN1-204ENST00000506163 CREMQ03060 361 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 ZP2Q05996 745 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 CYP24A1Q07973 514 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 PDXDC1Q6P996 788 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 KREMEN2Q8NCW0 462 aa19.28■□□□□ 0.68
SMN1-204ENST00000506163 TMEM174Q8WUU8 243 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms