RNA–Protein interactions for RNA: ENST00000505077.1

RFC1-210, Transcript of replication factor C subunit 1, humanhuman

TSL 4

Gene RFC1, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-210ENST00000505077 PHACTR2O75167 634 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 ITGB3P05106 788 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 LAG3P18627 525 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 RFX1P22670 979 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 PPM1AP35813 382 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 PIK3CAP42336 1068 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 RBP5P82980 135 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 FANCCQ00597 558 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 TRPC3Q13507 836 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 NCOA4Q13772 614 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 CBWD6Q4V339 395 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 CBWD3Q5JTY5 395 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 CBWD5Q5RIA9 395 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 GBP6Q6ZN66 633 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 COLGALT2Q8IYK4 626 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 ZNF516Q92618 1163 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 IQCDQ96DY2 449 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 FAM81BQ96LP2 452 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 ERGIC2Q96RQ1 377 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 POP1Q99575 1024 aaKnown RBP11.06□□□□□ -0.64
RFC1-210ENST00000505077 PRO3102Q9H379 93 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 AAASQ9NRG9 546 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 GCNT4Q9P109 453 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 PLAGL2Q9UPG8 496 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 PCDHA11Q9Y5I1 949 aa11.06□□□□□ -0.64
RFC1-210ENST00000505077 A0A1W2PQC6 194 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 FSD2A1L4K1 749 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 PIRO00625 290 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 ASS1P00966 412 aaKnown RBP11.05□□□□□ -0.64
RFC1-210ENST00000505077 P4HA1P13674 534 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 POLR2BP30876 1174 aaKnown RBP11.05□□□□□ -0.64
RFC1-210ENST00000505077 ALDH7A1P49419 539 aaKnown RBP11.05□□□□□ -0.64
RFC1-210ENST00000505077 TAF6P49848 677 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 GATMP50440 423 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 AFF1P51825 1210 aaKnown RBP11.05□□□□□ -0.64
RFC1-210ENST00000505077 UBASH3AP57075 661 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 UBXN1Q04323 297 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 SOX4Q06945 474 aaPredicted RBP11.05□□□□□ -0.64
RFC1-210ENST00000505077 RAB30Q15771 203 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 UPP1Q16831 310 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 EXOC3L4Q17RC7 722 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 SGSM1Q2NKQ1 1148 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 SV2CQ496J9 727 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 EPC2Q52LR7 807 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 C9orf57Q5W0N0 161 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 LMBRD2Q68DH5 695 aaPredicted RBP11.05□□□□□ -0.64
RFC1-210ENST00000505077 DCLRE1AQ6PJP8 1040 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 FIBCD1Q8N539 461 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 CXorf38Q8TB03 319 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 TAS1R2Q8TE23 839 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 CLP1Q92989 425 aaKnown RBP11.05□□□□□ -0.64
RFC1-210ENST00000505077 C18orf25Q96B23 403 aaPredicted RBP11.05□□□□□ -0.64
RFC1-210ENST00000505077 SAMD11Q96NU1 681 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 VPS16Q9H269 839 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 CXCL16Q9H2A7 254 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 RAB20Q9NX57 234 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 MIOSQ9NXC5 875 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 PATJQ8NI35 1801 aa11.05□□□□□ -0.64
RFC1-210ENST00000505077 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.04□□□□□ -0.64
RFC1-210ENST00000505077 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.04□□□□□ -0.64
RFC1-210ENST00000505077 PODXLO00592 558 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 TRAPPC3O43617 180 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 HLA-DRAP01903 254 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 KRT19P08727 400 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 AARSP49588 968 aaKnown RBP eCLIP11.04□□□□□ -0.64
RFC1-210ENST00000505077 ELAVL2Q12926 359 aaKnown RBP11.04□□□□□ -0.64
RFC1-210ENST00000505077 NR1I3Q14994 352 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 ZNF699Q32M78 642 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 PAN2Q504Q3 1202 aaKnown RBP11.04□□□□□ -0.64
RFC1-210ENST00000505077 WDR44Q5JSH3 913 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 FAM117BQ6P1L5 589 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 TTC39CQ8N584 583 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 SPATA18Q8TC71 538 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 MRFAP1L1Q96HT8 127 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 HPDLQ96IR7 371 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 ZNF558Q96NG5 402 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 COLEC11Q9BWP8 271 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 PLVAPQ9BX97 442 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 CWH43Q9H720 699 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 NRDE2Q9H7Z3 1164 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 MMRN2Q9H8L6 949 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 PLCB1Q9NQ66 1216 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 IFNKQ9P0W0 207 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 PCDH10Q9P2E7 1040 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 SIX4Q9UIU6 781 aa11.04□□□□□ -0.64
RFC1-210ENST00000505077 MRPL42Q9Y6G3 142 aaKnown RBP11.04□□□□□ -0.64
RFC1-210ENST00000505077 CASTOR2A6NHX0 329 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 DDHD2O94830 711 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 VNN1O95497 513 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 ALDH2P05091 517 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 TBXAS1P24557 533 aaPredicted RBP11.03□□□□□ -0.64
RFC1-210ENST00000505077 MRE11P49959 708 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 CLCNKBP51801 687 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 BCAR1P56945 870 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 NOP14P78316 857 aaKnown RBP11.03□□□□□ -0.64
RFC1-210ENST00000505077 SMAD3P84022 425 aaKnown RBP11.03□□□□□ -0.64
RFC1-210ENST00000505077 GCNT1Q02742 428 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 ZNF667Q5HYK9 610 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 TRIM65Q6PJ69 517 aa11.03□□□□□ -0.64
RFC1-210ENST00000505077 ENOSF1Q7L5Y1 443 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms