RNA–Protein interactions for RNA: ENST00000504719.6

PVT1-201, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 754 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-201ENST00000504719 TISP43B9A030 160 aa27.56■■■□□ 2
PVT1-201ENST00000504719 TBC1D4O60343 1298 aa27.56■■■□□ 2
PVT1-201ENST00000504719 HOXA9P31269 272 aa27.56■■■□□ 2
PVT1-201ENST00000504719 MCM4P33991 863 aa27.56■■■□□ 2
PVT1-201ENST00000504719 MRPL58Q14197 206 aaKnown RBP27.56■■■□□ 2
PVT1-201ENST00000504719 UVSSAQ2YD98 709 aa27.56■■■□□ 2
PVT1-201ENST00000504719 PPM1LQ5SGD2 360 aa27.56■■■□□ 2
PVT1-201ENST00000504719 CD302Q8IX05 232 aa27.56■■■□□ 2
PVT1-201ENST00000504719 IQUBQ8NA54 791 aa27.56■■■□□ 2
PVT1-201ENST00000504719 TBC1D7Q9P0N9 293 aa27.56■■■□□ 2
PVT1-201ENST00000504719 ZNF318Q5VUA4 2279 aa27.55■■■□□ 2
PVT1-201ENST00000504719 POLR2DO15514 142 aaKnown RBP27.55■■■□□ 2
PVT1-201ENST00000504719 XPOTO43592 962 aaKnown RBP27.55■■■□□ 2
PVT1-201ENST00000504719 IDEP14735 1019 aa27.55■■■□□ 2
PVT1-201ENST00000504719 ADALQ6DHV7 355 aa27.55■■■□□ 2
PVT1-201ENST00000504719 SLC8B1Q6J4K2 584 aa27.55■■■□□ 2
PVT1-201ENST00000504719 IKZF4Q9H2S9 585 aa27.55■■■□□ 2
PVT1-201ENST00000504719 CUEDC2Q9H467 287 aa27.55■■■□□ 2
PVT1-201ENST00000504719 GDPD2Q9HCC8 539 aa27.55■■■□□ 2
PVT1-201ENST00000504719 OLFML3Q9NRN5 406 aa27.55■■■□□ 2
PVT1-201ENST00000504719 H7C4K7 107 aa27.54■■■□□ 2
PVT1-201ENST00000504719 GBP2P32456 591 aaPredicted RBP27.54■■■□□ 2
PVT1-201ENST00000504719 L1TD1Q5T7N2 865 aaKnown RBP27.54■■■□□ 2
PVT1-201ENST00000504719 RTL10Q7L3V2 364 aa27.54■■■□□ 2
PVT1-201ENST00000504719 SLC7A14Q8TBB6 771 aa27.54■■■□□ 2
PVT1-201ENST00000504719 FAM212AQ96EL1 285 aa27.54■■■□□ 2
PVT1-201ENST00000504719 MYADMQ96S97 322 aa27.54■■■□□ 2
PVT1-201ENST00000504719 SMOC2Q9H3U7 446 aa27.54■■■□□ 2
PVT1-201ENST00000504719 PANK4Q9NVE7 773 aa27.54■■■□□ 2
PVT1-201ENST00000504719 AGO2Q9UKV8 859 aaKnown RBP27.54■■■□□ 2
PVT1-201ENST00000504719 PCDHB8Q9UN66 801 aa27.54■■■□□ 2
PVT1-201ENST00000504719 GCNT3O95395 438 aa27.53■■■□□ 2
PVT1-201ENST00000504719 ACOT2P49753 483 aa27.53■■■□□ 2
PVT1-201ENST00000504719 GUCY2FP51841 1108 aa27.53■■■□□ 2
PVT1-201ENST00000504719 ROR1Q01973 937 aa27.53■■■□□ 2
PVT1-201ENST00000504719 KCNA1Q09470 495 aa27.53■■■□□ 2
PVT1-201ENST00000504719 SPATA1Q5VX52 437 aa27.53■■■□□ 2
PVT1-201ENST00000504719 JADE1Q6IE81 842 aa27.53■■■□□ 2
PVT1-201ENST00000504719 APPL2Q8NEU8 664 aa27.53■■■□□ 2
PVT1-201ENST00000504719 ACCSQ96QU6 501 aa27.53■■■□□ 2
PVT1-201ENST00000504719 TNMDQ9H2S6 317 aa27.53■■■□□ 2
PVT1-201ENST00000504719 EPS15L1Q9UBC2 864 aa27.53■■■□□ 2
PVT1-201ENST00000504719 KCNH3Q9ULD8 1083 aa27.53■■■□□ 2
PVT1-201ENST00000504719 EXOC7Q9UPT5 735 aa27.53■■■□□ 2
PVT1-201ENST00000504719 PCDHB13Q9Y5F0 798 aa27.53■■■□□ 2
PVT1-201ENST00000504719 NOTCH4Q99466 2003 aa27.52■■■□□ 2
PVT1-201ENST00000504719 M0QZQ0 153 aa27.52■■■□□ 2
PVT1-201ENST00000504719 CCL16O15467 120 aa27.52■■■□□ 2
PVT1-201ENST00000504719 ABLIM3O94929 683 aa27.52■■■□□ 2
PVT1-201ENST00000504719 POU2F2P09086 479 aa27.52■■■□□ 2
PVT1-201ENST00000504719 CMA1P23946 247 aa27.52■■■□□ 2
PVT1-201ENST00000504719 ADSSP30520 456 aa27.52■■■□□ 2
PVT1-201ENST00000504719 CASP5P51878 434 aa27.52■■■□□ 2
PVT1-201ENST00000504719 POSTNQ15063 836 aa27.52■■■□□ 2
PVT1-201ENST00000504719 GRASPQ7Z6J2 395 aaPredicted RBP27.52■■■□□ 2
PVT1-201ENST00000504719 ZNF461Q8TAF7 563 aa27.52■■■□□ 2
PVT1-201ENST00000504719 KCNK12Q9HB15 430 aa27.52■■■□□ 2
PVT1-201ENST00000504719 KBTBD4Q9NVX7 518 aa27.52■■■□□ 2
PVT1-201ENST00000504719 FBXL5Q9UKA1 691 aa27.52■■■□□ 2
PVT1-201ENST00000504719 DERAQ9Y315 318 aa27.52■■■□□ 2
PVT1-201ENST00000504719 A0A1B0GVL5 298 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 WDR27A2RRH5 827 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 XYLBO75191 536 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 AARSP49588 968 aaKnown RBP eCLIP27.51■■□□□ 1.99
PVT1-201ENST00000504719 POU5F1Q01860 360 aaKnown RBP27.51■■□□□ 1.99
PVT1-201ENST00000504719 ALCAMQ13740 583 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 CTXN3Q4LDR2 81 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 FBXL6Q8N531 539 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 BEST2Q8NFU1 509 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 POMGNT1Q8WZA1 660 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 FGFBP2Q9BYJ0 223 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 LRRC27Q9C0I9 530 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 ASB7Q9H672 318 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP27.51■■□□□ 1.996e-7■■■■□ 24.2
PVT1-201ENST00000504719 IGSF9Q9P2J2 1179 aa27.51■■□□□ 1.99
PVT1-201ENST00000504719 CIZ1Q9ULV3 898 aaPredicted RBP27.51■■□□□ 1.99
PVT1-201ENST00000504719 NFICP08651 508 aa27.5■■□□□ 1.99
PVT1-201ENST00000504719 PFKFB1P16118 471 aa27.5■■□□□ 1.99
PVT1-201ENST00000504719 TMEM132DQ14C87 1099 aa27.5■■□□□ 1.99
PVT1-201ENST00000504719 ZNF280DQ6N043 979 aa27.5■■□□□ 1.99
PVT1-201ENST00000504719 CRELD2Q6UXH1 353 aaPredicted RBP27.5■■□□□ 1.99
PVT1-201ENST00000504719 GET4Q7L5D6 327 aaPredicted RBP27.5■■□□□ 1.99
PVT1-201ENST00000504719 CCDC65Q8IXS2 484 aa27.5■■□□□ 1.99
PVT1-201ENST00000504719 KMT2EQ8IZD2 1858 aa27.5■■□□□ 1.99
PVT1-201ENST00000504719 SCN1AP35498 2009 aa27.5■■□□□ 1.99
PVT1-201ENST00000504719 PPEF2O14830 753 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 FSHRP23945 695 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 PLA2G5P39877 138 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 ARPP19P56211 112 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 NTHL1P78549 312 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 AMPD3Q01432 767 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 TDGQ13569 410 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 PYM1Q9BRP8 204 aaKnown RBP27.49■■□□□ 1.99
PVT1-201ENST00000504719 KCNH6Q9H252 994 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 MAGEF1Q9HAY2 307 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 POLIQ9UNA4 740 aa27.49■■□□□ 1.99
PVT1-201ENST00000504719 LAMP2P13473 410 aa27.48■■□□□ 1.99
PVT1-201ENST00000504719 ATF2P15336 505 aa27.48■■□□□ 1.99
PVT1-201ENST00000504719 SUGP1Q8IWZ8 645 aaKnown RBP27.48■■□□□ 1.99
PVT1-201ENST00000504719 FAM122AQ96E09 287 aa27.48■■□□□ 1.99
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms