RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 CEP57Q86XR8 500 aa17.83■□□□□ 0.44
SCLT1-205ENST00000503401 NT5DC4Q86YG4 428 aa17.83■□□□□ 0.44
SCLT1-205ENST00000503401 WDR49Q8IV35 697 aa17.83■□□□□ 0.44
SCLT1-205ENST00000503401 PARD3BQ8TEW8 1205 aa17.83■□□□□ 0.44
SCLT1-205ENST00000503401 CACTINQ8WUQ7 758 aaKnown RBP17.83■□□□□ 0.44
SCLT1-205ENST00000503401 CGRRF1Q99675 332 aa17.83■□□□□ 0.44
SCLT1-205ENST00000503401 HERC2P3Q9BVR0 1158 aa17.83■□□□□ 0.44
SCLT1-205ENST00000503401 NSUN3Q9H649 340 aaKnown RBP17.83■□□□□ 0.44
SCLT1-205ENST00000503401 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.82■□□□□ 0.44
SCLT1-205ENST00000503401 ANO9A1A5B4 782 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 LRRIQ3A6PVS8 624 aaPredicted RBP17.82■□□□□ 0.44
SCLT1-205ENST00000503401 PIRO00625 290 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 PER2O15055 1255 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 CXCL14O95715 111 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 KRT19P08727 400 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 POLR2BP30876 1174 aaKnown RBP17.82■□□□□ 0.44
SCLT1-205ENST00000503401 GTF2F1P35269 517 aaKnown RBP eCLIP17.82■□□□□ 0.44
SCLT1-205ENST00000503401 PSMC2P35998 433 aaKnown RBP17.82■□□□□ 0.44
SCLT1-205ENST00000503401 DUOXA2Q1HG44 320 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 TIGD5Q53EQ6 642 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 RTP2Q5QGT7 225 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 ZC3H3Q8IXZ2 948 aaKnown RBP17.82■□□□□ 0.44
SCLT1-205ENST00000503401 CSGALNACT2Q8N6G5 542 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 MLKLQ8NB16 471 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 ZNF516Q92618 1163 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 ANKRD36BP1Q96IX9 119 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 SIX4Q9UIU6 781 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 STXBP5LQ9Y2K9 1186 aa17.82■□□□□ 0.44
SCLT1-205ENST00000503401 BICDL2A1A5D9 508 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 SPTLC1O15269 473 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 TNNC2P02585 160 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 TRIM49P0CI25 452 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 TRIM49CP0CI26 452 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 TKTP29401 623 aaKnown RBP17.81■□□□□ 0.44
SCLT1-205ENST00000503401 GLUD2P49448 558 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 SMC1AQ14683 1233 aaKnown RBP17.81■□□□□ 0.44
SCLT1-205ENST00000503401 PTPN14Q15678 1187 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 KLHL40Q2TBA0 621 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 USP41Q3LFD5 358 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 KIAA1841Q6NSI8 718 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 MRPL43Q8N983 215 aaKnown RBP17.81■□□□□ 0.44
SCLT1-205ENST00000503401 MAFAQ8NHW3 353 aaPredicted RBP17.81■□□□□ 0.44
SCLT1-205ENST00000503401 CXorf38Q8TB03 319 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 MED15Q96RN5 788 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 NGRNQ9NPE2 291 aaKnown RBP17.81■□□□□ 0.44
SCLT1-205ENST00000503401 AGAP1Q9UPQ3 857 aa17.81■□□□□ 0.44
SCLT1-205ENST00000503401 C2orf71A6NGG8 1288 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 URODP06132 367 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 EPB41P11171 864 aaKnown RBP17.8■□□□□ 0.44
SCLT1-205ENST00000503401 VAMP7P51809 220 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 LILRA4P59901 499 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 C1orf220Q5T0J3 134 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 PRSS55Q6UWB4 352 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-205ENST00000503401 RIN2Q8WYP3 895 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-205ENST00000503401 IGFLR1Q9H665 355 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 MRPL17Q9NRX2 175 aaKnown RBP17.8■□□□□ 0.44
SCLT1-205ENST00000503401 CHST7Q9NS84 486 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-205ENST00000503401 MAPK13O15264 365 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 TRAPPC3O43617 180 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 KRT13P13646 458 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 NRIP1P48552 1158 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 DSG1Q02413 1049 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 ELAVL2Q12926 359 aaKnown RBP17.8■□□□□ 0.44
SCLT1-205ENST00000503401 BFSP1Q12934 665 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 KIAA0319Q5VV43 1072 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 SASS6Q6UVJ0 657 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 INTS8Q75QN2 995 aaKnown RBP17.8■□□□□ 0.44
SCLT1-205ENST00000503401 TRAPPC11Q7Z392 1133 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 BORCS6Q96GS4 357 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 TTPALQ9BTX7 342 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 TLE6Q9H808 572 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 MMRN2Q9H8L6 949 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 RWDD2AQ9UIY3 292 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 ITGA11Q9UKX5 1188 aa17.8■□□□□ 0.44
SCLT1-205ENST00000503401 TIMM13Q9Y5L4 95 aaPredicted RBP17.8■□□□□ 0.44
SCLT1-205ENST00000503401 LILRB3O75022 631 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 RPL17P18621 184 aaKnown RBP17.79■□□□□ 0.44
SCLT1-205ENST00000503401 PTMSP20962 102 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 FGFR3P22607 806 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 RBM10P98175 930 aaKnown RBP17.79■□□□□ 0.44
SCLT1-205ENST00000503401 HYAL1Q12794 435 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 BMS1Q14692 1282 aaKnown RBP17.79■□□□□ 0.44
SCLT1-205ENST00000503401 SKIV2LQ15477 1246 aaKnown RBP17.79■□□□□ 0.44
SCLT1-205ENST00000503401 TDRD10Q5VZ19 366 aaKnown RBP17.79■□□□□ 0.44
SCLT1-205ENST00000503401 PDE12Q6L8Q7 609 aaKnown RBP17.79■□□□□ 0.44
SCLT1-205ENST00000503401 DSTYKQ6XUX3 929 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 GLYCTKQ8IVS8 523 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 TMC2Q8TDI7 906 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 SUSD3Q96L08 255 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 MKNK1Q9BUB5 465 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 SRRTQ9BXP5 876 aaKnown RBP17.79■□□□□ 0.44
SCLT1-205ENST00000503401 STK39Q9UEW8 545 aa17.79■□□□□ 0.44
SCLT1-205ENST00000503401 SLC16A3O15427 465 aaKnown RBP17.78■□□□□ 0.44
SCLT1-205ENST00000503401 CST3P01034 146 aaPredicted RBP17.78■□□□□ 0.44
SCLT1-205ENST00000503401 CNPP09543 421 aaKnown RBP17.78■□□□□ 0.44
SCLT1-205ENST00000503401 AARSP49588 968 aaKnown RBP eCLIP17.78■□□□□ 0.44
SCLT1-205ENST00000503401 TAF6P49848 677 aa17.78■□□□□ 0.44
SCLT1-205ENST00000503401 CLDN10P78369 228 aa17.78■□□□□ 0.44
SCLT1-205ENST00000503401 RBP5P82980 135 aa17.78■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms