RNA–Protein interactions for RNA: ENST00000498719.1

FN1-227, Transcript of fibronectin 1, humanhuman

TSL 2

Gene FN1, Length 2,433 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-227ENST00000498719 AFPP02771 609 aaKnown RBP9.57□□□□□ -0.88
FN1-227ENST00000498719 IVLP07476 585 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 NPR1P16066 1061 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 ATF7P17544 494 aaPredicted RBP9.57□□□□□ -0.88
FN1-227ENST00000498719 AP3B2Q13367 1082 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 CTTNQ14247 550 aaKnown RBP9.57□□□□□ -0.88
FN1-227ENST00000498719 SEZ6Q53EL9 994 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 ZC2HC1CQ53FD0 456 aaPredicted RBP9.57□□□□□ -0.88
FN1-227ENST00000498719 INTS11Q5TA45 600 aaKnown RBP9.57□□□□□ -0.88
FN1-227ENST00000498719 FASTKD5Q7L8L6 764 aaKnown RBP9.57□□□□□ -0.88
FN1-227ENST00000498719 KLHL7Q8IXQ5 586 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 SH2D3CQ8N5H7 860 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 GOLM1Q8NBJ4 401 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 ZDHHC16Q969W1 377 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 EXOC2Q96KP1 924 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 ZIM3Q96PE6 472 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 BCO2Q9BYV7 579 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 TDRD3Q9H7E2 651 aaKnown RBP9.57□□□□□ -0.88
FN1-227ENST00000498719 VAV3Q9UKW4 847 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 TRAF3IP3Q9Y228 551 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 KIF13BQ9NQT8 1826 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 MYH11P35749 1972 aa9.57□□□□□ -0.88
FN1-227ENST00000498719 KCNK3O14649 394 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 NR3C1P04150 777 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 NMT1P30419 496 aaKnown RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 SREBF1P36956 1147 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 NOP2P46087 812 aaKnown RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 IREB2P48200 963 aaKnown RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 EPHA4P54764 986 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 CCDC85BQ15834 202 aaPredicted RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 Q4G0T1 1027 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 SLC27A3Q5K4L6 730 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 TATDN1Q6P1N9 297 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 EMBQ6PCB8 327 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 ARHGAP27Q6ZUM4 889 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 CARNMT1Q8N4J0 409 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 MYCT1Q8N699 235 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 FBXO27Q8NI29 283 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 CASKIN2Q8WXE0 1202 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 RSRC1Q96IZ7 334 aaKnown RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 SH3GL2Q99962 352 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 GLT8D2Q9H1C3 349 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 SMOC1Q9H4F8 434 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 RMI1Q9H9A7 625 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 TRMT13Q9NUP7 481 aaKnown RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 TMEM51Q9NW97 253 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 FOXD3Q9UJU5 478 aaPredicted RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 NAGPAQ9UK23 515 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 CRYL1Q9Y2S2 319 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 RAD51CO43502 376 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 FBXO24O75426 580 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 POLR2BP30876 1174 aaKnown RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 HOXA7P31268 230 aaPredicted RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 CTNNA1P35221 906 aaKnown RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 PPARDQ03181 441 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 COG2Q14746 738 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 EPHA7Q15375 998 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 KIAA1755Q5JYT7 1200 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 FAAH2Q6GMR7 532 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 MOXD1Q6UVY6 613 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 FRMD5Q7Z6J6 570 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 COL23A1Q86Y22 540 aaPredicted RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 ERMNQ8TAM6 284 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 SLC35C1Q96A29 364 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 CCDC43Q96MW1 224 aaKnown RBP9.56□□□□□ -0.88
FN1-227ENST00000498719 SLC13A1Q9BZW2 595 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 SIX2Q9NPC8 291 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 GDF3Q9NR23 364 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 GCNT4Q9P109 453 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 SEL1LQ9UBV2 794 aa9.56□□□□□ -0.88
FN1-227ENST00000498719 SLX4Q8IY92 1834 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 PDXKO00764 312 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 TGFB1I1O43294 461 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 SLC4A1P02730 911 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 PF4P02776 101 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 MMP10P09238 476 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 XPAP23025 273 aaPredicted RBP9.55□□□□□ -0.88
FN1-227ENST00000498719 IRAK1P51617 712 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 SLC10A6Q3KNW5 377 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 ALKBH5Q6P6C2 394 aaKnown RBP9.55□□□□□ -0.88
FN1-227ENST00000498719 TMEM179Q6ZVK1 233 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 CATSPER4Q7RTX7 472 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 IFT20Q8IY31 132 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 USP38Q8NB14 1042 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 ST13P5Q8NFI4 369 aaPredicted RBP9.55□□□□□ -0.88
FN1-227ENST00000498719 CAVIN3Q969G5 261 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 NKD1Q969G9 470 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 TTC17Q96AE7 1141 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 WDR18Q9BV38 432 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 GPSM3Q9Y4H4 160 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 ZNF233A6NK53 670 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 CALUO43852 315 aaPredicted RBP9.55□□□□□ -0.88
FN1-227ENST00000498719 ECE2O60344 883 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 SHOX2O60902 331 aaPredicted RBP9.55□□□□□ -0.88
FN1-227ENST00000498719 HSF2BPO75031 334 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 TBCAO75347 108 aaKnown RBP9.55□□□□□ -0.88
FN1-227ENST00000498719 CFBP00751 764 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 BMP3P12645 472 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 IL4RP24394 825 aa9.55□□□□□ -0.88
FN1-227ENST00000498719 ALDH1B1P30837 517 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms