RNA–Protein interactions for RNA: ENST00000498325.5

HMGXB4-208, Transcript of HMG-box containing 4, humanhuman

TSL 3

Gene HMGXB4, Length 867 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-208ENST00000498325 CCDC173Q0VFZ6 552 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 COG2Q14746 738 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 POSTNQ15063 836 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 TKFCQ3LXA3 575 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 ANO6Q4KMQ2 910 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 RRAGBQ5VZM2 374 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 CATSPERGQ6ZRH7 1159 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 CABP7Q86V35 215 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 SLFN12Q8IYM2 578 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 PDILTQ8N807 584 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 TRIML1Q8N9V2 468 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 SMARCE1Q969G3 411 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 CCDC47Q96A33 483 aaKnown RBP5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 DHX58Q96C10 678 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 TIFAQ96CG3 184 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 CALML4Q96GE6 196 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 CDK5RAP3Q96JB5 506 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 MBOAT7Q96N66 472 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 MTMR9Q96QG7 549 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 UIMC1Q96RL1 719 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 MAF1Q9H063 256 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 TMEM60Q9H2L4 133 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 CUEDC2Q9H467 287 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 MAGEF1Q9HAY2 307 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 SLC38A10Q9HBR0 1119 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 FBXO28Q9NVF7 368 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 LRWD1Q9UFC0 647 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 TUBE1Q9UJT0 475 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 DCTN4Q9UJW0 460 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 CCPG1Q9ULG6 757 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 AFG3L2Q9Y4W6 797 aa5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 TCF20Q9UGU0 1960 aaKnown RBP5.91□□□□□ -1.46
HMGXB4-208ENST00000498325 LTBP2Q14767 1821 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 NOTOA8MTQ0 251 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 VWA5AO00534 786 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 CXCL11O14625 94 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 RRP9O43818 475 aaKnown RBP5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 LRRN2O75325 713 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 TDP2O95551 362 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 MYL1P05976 194 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 ALAS1P13196 640 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 ITGB8P26012 769 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 CIITAP33076 1130 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 SREBF1P36956 1147 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 STAT6P42226 847 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 TECP42680 631 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 HMGCS2P54868 508 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 PABPC4Q13310 644 aaKnown RBP eCLIP5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 PNOCQ13519 176 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 SEPT6Q14141 434 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 IL17AQ16552 155 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 Q4G0T1 1027 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 CT47A1Q5JQC4 288 aaPredicted RBP5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 MAP3K21Q5TCX8 1036 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 KRT79Q5XKE5 535 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 USP49Q70CQ1 688 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 CPXCR1Q8N123 301 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 IGSF22Q8N9C0 903 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 ERMNQ8TAM6 284 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 MZB1Q8WU39 189 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 TRIB2Q92519 343 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 PAGE5Q96GU1 130 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 RNPC3Q96LT9 517 aaKnown RBP5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 FAM20AQ96MK3 541 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 GSDMAQ96QA5 445 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 PARK7Q99497 189 aaKnown RBP5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 BPIFA3Q9BQP9 254 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 GTPBP4Q9BZE4 634 aaKnown RBP5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 LRRC27Q9C0I9 530 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 SENP6Q9GZR1 1112 aaPredicted RBP5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 TTC12Q9H892 705 aaPredicted RBP5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 RMND1Q9NWS8 449 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 GJD2Q9UKL4 321 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 PCDHA12Q9UN75 941 aa5.9□□□□□ -1.46
HMGXB4-208ENST00000498325 WDFY4Q6ZS81 3184 aa5.9□□□□□ -1.47
HMGXB4-208ENST00000498325 HSFX4A0A1B0GTS1 333 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 HSFX3A0A1B0GWH4 333 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 TRIM43BA6NCK2 446 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 GRXCR1A8MXD5 290 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 ATP2A1O14983 1001 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 CILPO75339 1184 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 EFEMP2O95967 443 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 USP17L7P0C7H9 530 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 CCND3P30281 292 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 HOXA7P31268 230 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 HOXA13P31271 388 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 HSD17B4P51659 736 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 RTP1P59025 263 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 GHRHRQ02643 423 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 NT5DC1Q5TFE4 455 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 OLFML2BQ68BL8 750 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 FASTKD5Q7L8L6 764 aaKnown RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 FAM129CQ86XR2 697 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 MB21D1Q8N884 522 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 MLKLQ8NB16 471 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 CYB5D2Q8WUJ1 264 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 CRYGNQ8WXF5 182 aa5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 TRIM43Q96BQ3 446 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 ACSF2Q96CM8 615 aaPredicted RBP5.89□□□□□ -1.47
HMGXB4-208ENST00000498325 ATG4CQ96DT6 458 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms