RNA–Protein interactions for RNA: ENST00000498160.5

CTDSP1-215, Transcript of CTD small phosphatase 1, humanhuman

TSL 5

Gene CTDSP1, Length 877 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-215ENST00000498160 GAS2L3Q86XJ1 694 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 ZNF516Q92618 1163 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 C18orf25Q96B23 403 aaPredicted RBP18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 RBSNQ9H1K0 784 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 RAB20Q9NX57 234 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 NUB1Q9Y5A7 615 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 MRPL42Q9Y6G3 142 aaKnown RBP18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 PTPRJQ12913 1337 aa18.92■□□□□ 0.62
CTDSP1-215ENST00000498160 A0A1B0GTH6 734 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 CASTOR2A6NHX0 329 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 HLA-DRAP01903 254 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 GALTP07902 379 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 RFX1P22670 979 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 POLR2BP30876 1174 aaKnown RBP18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 OR1G1P47890 313 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 BCAR1P56945 870 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 UBASH3AP57075 661 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 SOX4Q06945 474 aaPredicted RBP18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 EXOC3L4Q17RC7 722 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 LRIT3Q3SXY7 679 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 KCNT2Q6UVM3 1135 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 ZNF280BQ86YH2 543 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 SPATA18Q8TC71 538 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 IQCDQ96DY2 449 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 VPS16Q9H269 839 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 MMRN2Q9H8L6 949 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 PCDH10Q9P2E7 1040 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 AGAP1Q9UPQ3 857 aa18.91■□□□□ 0.62
CTDSP1-215ENST00000498160 NRP1O14786 923 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 B3GAT3O94766 335 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 FAM163BP0C2L3 166 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 CLCNKBP51801 687 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 UBXN1Q04323 297 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 KRT17Q04695 432 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 ZNF699Q32M78 642 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 CBWD6Q4V339 395 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 EPC2Q52LR7 807 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 CBWD3Q5JTY5 395 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 CBWD5Q5RIA9 395 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 APTXQ7Z2E3 356 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 TMCO2Q7Z6W1 182 aaPredicted RBP18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 TTC39CQ8N584 583 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 COLGALT1Q8NBJ5 622 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 TMEM169Q96HH4 297 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 TGS1Q96RS0 853 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 DNAI2Q9GZS0 605 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 CXCL16Q9H2A7 254 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 RTN4Q9NQC3 1192 aaKnown RBP18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 SPG21Q9NZD8 308 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 SIX4Q9UIU6 781 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 DSEQ9UL01 958 aa18.9■□□□□ 0.62
CTDSP1-215ENST00000498160 SF3B1O75533 1304 aaKnown RBP eCLIP18.9■□□□□ 0.623e-6■■■■■ 90.4
CTDSP1-215ENST00000498160 TMEM265A0A087WTH1 108 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 A0A1W2PQC6 194 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 GOLGA6L3A6NEY3 463 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 ASS1P00966 412 aaKnown RBP18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 SLC11A1P49279 550 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 BMS1Q14692 1282 aaKnown RBP18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 ZNF667Q5HYK9 610 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 DPH6Q7L8W6 267 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 EHBP1Q8NDI1 1231 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 CXorf38Q8TB03 319 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 HPDLQ96IR7 371 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 NT5C1BQ96P26 610 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 ERGIC2Q96RQ1 377 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 PBX4Q9BYU1 374 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 GOLGA2P5Q9HBQ8 144 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 GDAP2Q9NXN4 497 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 GCNT4Q9P109 453 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 DNAJB4Q9UDY4 337 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 ADAM28Q9UKQ2 775 aa18.89■□□□□ 0.61
CTDSP1-215ENST00000498160 LINC01553A4QN01 128 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 KPNA7A9QM74 516 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 C5orf67F2Z3F1 127 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 TADA2AO75478 443 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 CLSTN1O94985 981 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 TBXAS1P24557 533 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 BMPR1AP36894 532 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 AARSP49588 968 aaKnown RBP eCLIP18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 LILRA4P59901 499 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 YWHAEP62258 255 aaKnown RBP18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 TNNC1P63316 161 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 PLCB3Q01970 1234 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 UBE3AQ05086 875 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 PDXDC1Q6P996 788 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 ENOSF1Q7L5Y1 443 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 GPR65Q8IYL9 337 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 SLC39A11Q8N1S5 342 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 TAS1R2Q8TE23 839 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 IGSF21Q96ID5 467 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 C11orf84Q9BUA3 381 aaPredicted RBP18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 SLC28A3Q9HAS3 691 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 PUF60Q9UHX1 559 aaKnown RBP18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 LZTS1Q9Y250 596 aa18.88■□□□□ 0.61
CTDSP1-215ENST00000498160 SYN3O14994 580 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 VNN1O95497 513 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 CA3P07451 260 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 ODC1P11926 461 aa18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 TRIM21P19474 475 aaKnown RBP18.87■□□□□ 0.61
CTDSP1-215ENST00000498160 RABGGTBP53611 331 aa18.87■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms