RNA–Protein interactions for RNA: ENST00000498048.1

PDZRN3-212, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 5

Gene PDZRN3, Length 590 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-212ENST00000498048 CDR2Q01850 454 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 NCBP1Q09161 790 aaKnown RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 HIC1Q14526 733 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 SNX17Q15036 470 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 ELF2Q15723 593 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 DUOXA2Q1HG44 320 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 GNASQ5JWF2 1037 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 JADE1Q6IE81 842 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 TAF2Q6P1X5 1199 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 CXCL17Q6UXB2 119 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 SLC47A2Q86VL8 602 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 DNAAF5Q86Y56 855 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 PALB2Q86YC2 1186 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 PLPP6Q8IY26 295 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 RBBP8NLQ8NC74 664 aaPredicted RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 SLC30A5Q8TAD4 765 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 RAET1EQ8TD07 263 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 TSC1Q92574 1164 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 GOLGA1Q92805 767 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 TRIM6Q9C030 488 aaPredicted RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 SRRDQ9UH36 339 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 GTF2IRD1Q9UHL9 959 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 SALL4Q9UJQ4 1053 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 TSKSQ9UJT2 592 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 PIN4Q9Y237 131 aaKnown RBP8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 JRKLQ9Y4A0 524 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 NUB1Q9Y5A7 615 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 PCDHB4Q9Y5E5 795 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 PCDHGC5Q9Y5F6 944 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 TRPV2Q9Y5S1 764 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 SAR1BQ9Y6B6 198 aa8.66□□□□□ -1.02
PDZRN3-212ENST00000498048 VWA8A3KMH1 1905 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 FAM170AA1A519 330 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 LACTBL1A8MY62 500 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 TRPA1O75762 1119 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 PALMO75781 387 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 FTCDO95954 541 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 ITGB3P05106 788 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 CST5P28325 142 aaPredicted RBP8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 AXLP30530 894 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 GNA15P30679 374 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 NOP2P46087 812 aaKnown RBP8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 YARSP54577 528 aaKnown RBP8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 GALCP54803 685 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 BPIFB4P59827 614 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 MYL6P60660 151 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 MRPS6P82932 125 aaKnown RBP8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 FOXK1P85037 733 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 POU5F1Q01860 360 aaKnown RBP8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 ZNF667Q5HYK9 610 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 PAPD7Q5XG87 772 aaKnown RBP8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 TMEM270Q6UE05 265 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 RSPH3Q86UC2 560 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 ZNF677Q86XU0 584 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 ZNF710Q8N1W2 664 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 ZNF653Q96CK0 615 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 CAPZA3Q96KX2 299 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 SNX27Q96L92 541 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 ACAP3Q96P50 834 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 NXF3Q9H4D5 531 aaKnown RBP8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 ASB7Q9H672 318 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 ACP6Q9NPH0 428 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 RNF186Q9NXI6 227 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 TAS2R14Q9NYV8 317 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 PUF60Q9UHX1 559 aaKnown RBP8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 SNX12Q9UMY4 172 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 C2CD2Q9Y426 696 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 LTBP2Q14767 1821 aa8.65□□□□□ -1.02
PDZRN3-212ENST00000498048 A0A1B0GUA9 196 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CTAGE15A4D2H0 777 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 ANKRD62A6NC57 917 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 EFCAB8A8MWE9 144 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 THAP12O43422 761 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 NCK2O43639 380 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 RTN2O75298 545 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 RECQL4O94761 1208 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 TFRCP02786 760 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 RPLP2P05387 115 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 ASGR1P07306 291 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CTSHP09668 335 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CTAGE8P0CG41 777 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CHRNB2P17787 502 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 TCP1P17987 556 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CD58P19256 250 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 ACO1P21399 889 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 EIF4BP23588 611 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 POLR2BP30876 1174 aaKnown RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 ASPAP45381 313 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 DNA2P51530 1060 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CRYBB1P53674 252 aaPredicted RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 NKX3-2P78367 333 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CLEC16AQ2KHT3 1053 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 SGSM1Q2NKQ1 1148 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 NBPF20Q3BBV1 942 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 GDF6Q6KF10 455 aaPredicted RBP8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 TRIM72Q6ZMU5 477 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CTAGE6Q86UF2 777 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 NT5DC4Q86YG4 428 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CD302Q8IX05 232 aa8.64□□□□□ -1.03
PDZRN3-212ENST00000498048 CTAGE4Q8IX94 777 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms