RNA–Protein interactions for RNA: ENST00000496855.1

SNX13-211, Transcript of sorting nexin 13, humanhuman

TSL 1 (best)

Gene SNX13, Length 1,499 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-211ENST00000496855 THEMIS2Q5TEJ8 643 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 B3GNTL1Q67FW5 361 aaPredicted RBP6.3□□□□□ -1.4
SNX13-211ENST00000496855 Q6ZPA2 131 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 C3orf20Q8ND61 904 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 MARS2Q96GW9 593 aaKnown RBP6.3□□□□□ -1.4
SNX13-211ENST00000496855 PRRX2Q99811 253 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 PACSIN1Q9BY11 444 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 RHOBTB2Q9BYZ6 727 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 GTPBP4Q9BZE4 634 aaKnown RBP6.3□□□□□ -1.4
SNX13-211ENST00000496855 JKAMPQ9P055 326 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 CHPF2Q9P2E5 772 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 ANKFY1Q9P2R3 1169 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 USP25Q9UHP3 1055 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 POLHQ9Y253 713 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 AATKQ6ZMQ8 1374 aa6.3□□□□□ -1.4
SNX13-211ENST00000496855 LRRC14BA6NHZ5 514 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 UNC119BA6NIH7 251 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 SLC43A1O75387 559 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 GPANK1O95872 356 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 HSD11B2P80365 405 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 GUCY1B3Q02153 619 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 SLFN5Q08AF3 891 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 PGS1Q32NB8 556 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 SPDYE7PQ495Y7 208 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 FLYWCH1Q4VC44 716 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 UTP14CQ5TAP6 766 aaKnown RBP6.29□□□□□ -1.4
SNX13-211ENST00000496855 CCDC181Q5TID7 509 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 SLC4A10Q6U841 1118 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 PNKPQ96T60 521 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 MRIQ9BWK5 157 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 SERHL2Q9H4I8 314 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 ZNF180Q9UJW8 692 aa6.29□□□□□ -1.4
SNX13-211ENST00000496855 NT5C1B-RDH14C9J2C7 533 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 F2RL2O00254 374 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 SLC16A6O15403 523 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 CDKL5O76039 1030 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 AGFG2O95081 481 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 FCER1AP12319 257 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 KRT4P19013 534 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 DPTQ07507 201 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 ODR4Q5SWX8 454 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 FOXR2Q6PJQ5 311 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 ZNF365Q70YC5 407 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 LDLRAD3Q86YD5 345 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 VRK3Q8IV63 474 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 FAM43AQ8N2R8 423 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 RGMAQ96B86 450 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 RTFDC1Q9BY42 306 aaPredicted RBP6.28□□□□□ -1.4
SNX13-211ENST00000496855 KCNE5Q9UJ90 142 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 PNMA8BQ9ULN7 279 aaPredicted RBP6.28□□□□□ -1.4
SNX13-211ENST00000496855 THRAP3Q9Y2W1 955 aaKnown RBP6.28□□□□□ -1.4
SNX13-211ENST00000496855 NOX1Q9Y5S8 564 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 TMEM191CA6NGB0 347 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 PEX14O75381 377 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 SPDEFO95238 335 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 ARIH2O95376 493 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 SMARCA1P28370 1054 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 HK3P52790 923 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 TGFB2P61812 414 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 CXADRP78310 365 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 NOGQ13253 232 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 TP53BP2Q13625 1128 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 EXOC8Q8IYI6 725 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 JPH3Q8WXH2 748 aaPredicted RBP6.28□□□□□ -1.4
SNX13-211ENST00000496855 MVB12AQ96EY5 273 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 BOD1Q96IK1 185 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 MED15Q96RN5 788 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 CAMKK2Q96RR4 588 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 ALOXE3Q9BYJ1 711 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 WDR11Q9BZH6 1224 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 CDH19Q9H159 772 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 SIDT1Q9NXL6 827 aaKnown RBP6.28□□□□□ -1.4
SNX13-211ENST00000496855 RNF181Q9P0P0 153 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 HSFX1Q9UBD0 423 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 PCDHA3Q9Y5H8 950 aa6.28□□□□□ -1.4
SNX13-211ENST00000496855 FOSP01100 380 aaPredicted RBP6.27□□□□□ -1.41
SNX13-211ENST00000496855 FTLP02792 175 aaPredicted RBP6.27□□□□□ -1.41
SNX13-211ENST00000496855 FTH1P19P0C7X4 201 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 CYP2C19P33261 490 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 ZEB1P37275 1124 aaPredicted RBP6.27□□□□□ -1.41
SNX13-211ENST00000496855 MAP2K6P52564 334 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 HMGA2P52926 109 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 INHBCP55103 352 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 ATAT1Q5SQI0 421 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 LAIR1Q6GTX8 287 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 HPS3Q969F9 1004 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 RNF31Q96EP0 1072 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 MAP3K14Q99558 947 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 KRTAP4-5Q9BYR2 181 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 TMEM74BQ9NUR3 256 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 ZIM2Q9NZV7 527 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 SLC45A2Q9UMX9 530 aa6.27□□□□□ -1.41
SNX13-211ENST00000496855 MTO1Q9Y2Z2 717 aaKnown RBP6.27□□□□□ -1.41
SNX13-211ENST00000496855 CCDC194A0A1B0GVG4 234 aa6.26□□□□□ -1.41
SNX13-211ENST00000496855 FOXN1O15353 648 aa6.26□□□□□ -1.41
SNX13-211ENST00000496855 B3GALT2O43825 422 aa6.26□□□□□ -1.41
SNX13-211ENST00000496855 ERN1O75460 977 aaKnown RBP6.26□□□□□ -1.41
SNX13-211ENST00000496855 CCDC93Q567U6 631 aa6.26□□□□□ -1.41
SNX13-211ENST00000496855 IFIT1BQ5T764 474 aaKnown RBP6.26□□□□□ -1.41
SNX13-211ENST00000496855 HEATR3Q7Z4Q2 680 aa6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms