RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 SPDYCQ5MJ68 293 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 WDR78Q5VTH9 848 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 GPAT2Q6NUI2 795 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 KDM7AQ6ZMT4 941 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 PASD1Q8IV76 773 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 UBR7Q8N806 425 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 ZC3H15Q8WU90 426 aaKnown RBP13.92□□□□□ -0.18
GARNL3-220ENST00000496711 SMARCAD1Q9H4L7 1026 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 TMBIM4Q9HC24 238 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 NFS1Q9Y697 457 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 SCN4AP35499 1836 aa13.92□□□□□ -0.18
GARNL3-220ENST00000496711 TCRBV7S2A1N4TA0A589 114 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 A6NNZ2 444 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 ABLIM1O14639 778 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 PPFIA2O75334 1257 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 MYZAPP0CAP1 466 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 COILP38432 576 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-220ENST00000496711 ZNF132P52740 706 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 ZNF844Q08AG5 666 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 TUBB8Q3ZCM7 444 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 C9orf131Q5VYM1 1079 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 PHF13Q86YI8 300 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-220ENST00000496711 RHPN2Q8IUC4 686 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 SHCBP1Q8NEM2 672 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 VCPIP1Q96JH7 1222 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
GARNL3-220ENST00000496711 C11orf70Q9BRQ4 267 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 CPSF3Q9UKF6 684 aaKnown RBP13.91□□□□□ -0.18
GARNL3-220ENST00000496711 SCINQ9Y6U3 715 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 UTRNP46939 3433 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 MYO1FO00160 1098 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 PROSCO94903 275 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 CFHP08603 1231 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 RARAP10276 462 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 TXNP10599 105 aaKnown RBP13.91□□□□□ -0.18
GARNL3-220ENST00000496711 NR1D1P20393 614 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 GNGT1P63211 74 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 TTLL4Q14679 1199 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 DNAJC21Q5F1R6 531 aaKnown RBP13.91□□□□□ -0.18
GARNL3-220ENST00000496711 MPZL3Q6UWV2 235 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 ARMC9Q7Z3E5 817 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 COPS5Q92905 334 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 TXLNGYQ9BZA5 131 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 TRIM7Q9C029 511 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 MRPL47Q9HD33 250 aaKnown RBP13.91□□□□□ -0.18
GARNL3-220ENST00000496711 ADAM22Q9P0K1 906 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 PARP2Q9UGN5 583 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 SNX24Q9Y343 169 aa13.91□□□□□ -0.18
GARNL3-220ENST00000496711 SBDSQ9Y3A5 250 aaKnown RBP eCLIP13.91□□□□□ -0.18
GARNL3-220ENST00000496711 GRIN2DO15399 1336 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 ASB14A6NK59 587 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 FSCN2O14926 492 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 HBP1O60381 514 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 PROZP22891 400 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 EPHX2P34913 555 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 IRAK1P51617 712 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 C1QBPQ07021 282 aaKnown RBP13.9□□□□□ -0.18
GARNL3-220ENST00000496711 ZNF568Q3ZCX4 644 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 C2CD6Q53TS8 623 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 LLGL2Q6P1M3 1020 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 ZDHHC24Q6UX98 284 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 RUFY4Q6ZNE9 571 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 TSHZ1Q6ZSZ6 1077 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 PHLDB2Q86SQ0 1253 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 CCDC105Q8IYK2 499 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 OR2W6PQ8NHA6 318 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 TRAPPC12Q8WVT3 735 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 MAIP1Q8WWC4 291 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 PKNOX2Q96KN3 472 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 NLRP4Q96MN2 994 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 NIF3L1Q9GZT8 377 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 LRRC19Q9H756 370 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 GRHL1Q9NZI5 618 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 PASKQ96RG2 1323 aa13.9□□□□□ -0.18
GARNL3-220ENST00000496711 ACKR2O00590 384 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 EIF3HO15372 352 aaKnown RBP eCLIP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 PSTPIP1O43586 416 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 PPFIA4O75335 1185 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 CST3P01034 146 aaPredicted RBP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 HOXC6P09630 235 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 RPL21P46778 160 aaKnown RBP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 PLTPP55058 493 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 PTP4A2Q12974 167 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 SNAPC2Q13487 334 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 DUOXA2Q1HG44 320 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 ATF7IP2Q5U623 682 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 EMC10Q5UCC4 262 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 PLEKHA7Q6IQ23 1121 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 MMS22LQ6ZRQ5 1243 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 GTF3C2Q8WUA4 911 aaPredicted RBP13.89□□□□□ -0.19
GARNL3-220ENST00000496711 FAM212AQ96EL1 285 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 FZD8Q9H461 694 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 PNMA3Q9UL41 463 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 ATP8A1Q9Y2Q0 1164 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 INO80B-WBP1J3KQ70 363 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 ECEL1O95672 775 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 TMEM191BP0C7N4 346 aa13.89□□□□□ -0.19
GARNL3-220ENST00000496711 SSTR3P32745 418 aaPredicted RBP13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms