RNA–Protein interactions for RNA: ENST00000496570.1

DNMT3A-215, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 656 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-215ENST00000496570 MTCL1Q9Y4B5 1905 aaKnown RBP17.51■□□□□ 0.39
DNMT3A-215ENST00000496570 UBE4BO95155 1302 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 ANO9A1A5B4 782 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 EXTL3O43909 919 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 ZNF202O95125 648 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 GLUD1P00367 558 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 SPATA31D3P0C874 917 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 ITIH3Q06033 890 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 DPYDQ12882 1025 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 SNW1Q13573 536 aaKnown RBP17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 TMEM132DQ14C87 1099 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 SCARA3Q6AZY7 606 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 SPATA31D4Q6ZUB0 917 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 STXBP4Q6ZWJ1 553 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 NELFCDQ8IXH7 590 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 FMR1NBQ8N0W7 255 aaPredicted RBP17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 ENGASEQ8NFI3 743 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 FAM84AQ96KN4 292 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 AGPAT3Q9NRZ7 376 aa17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 CIZ1Q9ULV3 898 aaPredicted RBP17.5■□□□□ 0.39
DNMT3A-215ENST00000496570 C2orf16Q68DN1 1984 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 M0QZQ0 153 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 PIRO00625 290 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 SYN3O14994 580 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 SPTLC1O15269 473 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 TRAPPC3O43617 180 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 MYL1P05976 194 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 CREMQ03060 361 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 CBX2Q14781 532 aaPredicted RBP17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 C9orf57Q5W0N0 161 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 ARMCX5Q6P1M9 558 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 TMC5Q6UXY8 1006 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 GJD3Q8N144 294 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 CXorf38Q8TB03 319 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 POMKQ9H5K3 350 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 SFXN1Q9H9B4 322 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 BACE2Q9Y5Z0 518 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 DENND4AQ7Z401 1863 aa17.49■□□□□ 0.39
DNMT3A-215ENST00000496570 LOC730098B7Z3J9 87 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 IL18RAPO95256 599 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 LDHAP00338 332 aaKnown RBP17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 MCM4P33991 863 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 RAB33AQ14088 237 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 VARS2Q5ST30 1063 aaKnown RBP17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 PDXDC1Q6P996 788 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 GPR149Q86SP6 731 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 CBWD2Q8IUF1 395 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 GPD1LQ8N335 351 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 BEST2Q8NFU1 509 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 CMASQ8NFW8 434 aaPredicted RBP17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 HDAC7Q8WUI4 952 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 ZNF707Q96C28 371 aaPredicted RBP17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 PHF7Q9BWX1 381 aaPredicted RBP17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 RBAKQ9NYW8 714 aaPredicted RBP17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 HSPBP1Q9NZL4 362 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 FBXW11Q9UKB1 542 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 NUB1Q9Y5A7 615 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 TSC2P49815 1807 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 SCN1AP35498 2009 aa17.48■□□□□ 0.39
DNMT3A-215ENST00000496570 PTPRJQ12913 1337 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 KIAA0391O15091 583 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 CLIC2O15247 247 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 XPOTO43592 962 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 RFPL2O75678 378 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 RPN1P04843 607 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 OR1D2P34982 312 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 LILRA4P59901 499 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 PSMD2Q13200 908 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 KNOP1Q1ED39 458 aaKnown RBP17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 SLC8B1Q6J4K2 584 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 ANKS3Q6ZW76 656 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 KREMEN2Q8NCW0 462 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 GZF1Q9H116 711 aaPredicted RBP17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 PLEKHA4Q9H4M7 779 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 PDE11AQ9HCR9 933 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 EXOC1Q9NV70 894 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 DPP3Q9NY33 737 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 PCDHB8Q9UN66 801 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 CDY1Q9Y6F8 540 aa17.47■□□□□ 0.39
DNMT3A-215ENST00000496570 RHOBTB3O94955 611 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 CES5AQ6NT32 575 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 C15orf39Q6ZRI6 1047 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 NT5DC4Q86YG4 428 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 C12orf56Q8IXR9 622 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 C1orf127Q8N9H9 656 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 BORCS6Q96GS4 357 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 RHOBTB2Q9BYZ6 727 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 KCTD10Q9H3F6 313 aa17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 TIMM13Q9Y5L4 95 aaPredicted RBP17.46■□□□□ 0.39
DNMT3A-215ENST00000496570 CCDC195A0A1B0GUA6 201 aa17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 SSTR3P32745 418 aaPredicted RBP17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 MTHFRP42898 656 aa17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 SNRPFP62306 86 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 ROR1Q01973 937 aa17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 NECTIN4Q96NY8 510 aa17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 POP1Q99575 1024 aaKnown RBP17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 FBXL5Q9UKA1 691 aa17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 TRIOO75962 3097 aa17.45■□□□□ 0.38
DNMT3A-215ENST00000496570 WDR27A2RRH5 827 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms