RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 HSFX1Q9UBD0 423 aa7.43□□□□□ -1.22
SF3B1-212ENST00000496458 KCNE5Q9UJ90 142 aa7.43□□□□□ -1.22
SF3B1-212ENST00000496458 DMRT1Q9Y5R6 373 aa7.43□□□□□ -1.22
SF3B1-212ENST00000496458 LRRC14BA6NHZ5 514 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 DTNBO60941 627 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 AGFG2O95081 481 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 PDGFRBP09619 1106 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 FLYWCH1Q4VC44 716 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 UTP14CQ5TAP6 766 aaKnown RBP7.42□□□□□ -1.22
SF3B1-212ENST00000496458 HECTD2Q5U5R9 776 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 PCSK4Q6UW60 755 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 IL17RDQ8NFM7 739 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 TLR10Q9BXR5 811 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 MAN1C1Q9NR34 630 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 IP6K2Q9UHH9 426 aa7.42□□□□□ -1.22
SF3B1-212ENST00000496458 ALDH1L1O75891 902 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 GCP02774 474 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 ITGAMP11215 1152 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 PDCP20941 246 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 MALP21145 153 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 USP14P54578 494 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 CATIPQ7Z7H3 387 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 AGAP2Q99490 1192 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 SLITRK6Q9H5Y7 841 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 JKAMPQ9P055 326 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 TESQ9UGI8 421 aaKnown RBP7.41□□□□□ -1.22
SF3B1-212ENST00000496458 CDYLQ9Y232 598 aa7.41□□□□□ -1.22
SF3B1-212ENST00000496458 PIPSLA2A3N6 862 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 SNAPC2Q13487 334 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 ABHD17BQ5VST6 288 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 SLC4A10Q6U841 1118 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.4□□□□□ -1.22
SF3B1-212ENST00000496458 USP45Q70EL2 814 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 ZNF365Q70YC5 407 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 FAM43AQ8N2R8 423 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 SUPT20HQ8NEM7 779 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 NACC2Q96BF6 587 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 GALNT9Q9HCQ5 603 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 SLC45A2Q9UMX9 530 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 SHROOM4Q9ULL8 1493 aa7.4□□□□□ -1.22
SF3B1-212ENST00000496458 COL4A3Q01955 1670 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 F2RL2O00254 374 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 SLC43A1O75387 559 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 POU2F2P09086 479 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 EGR2P11161 476 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-212ENST00000496458 FXR1P51114 621 aaKnown RBP eCLIP7.39□□□□□ -1.233e-6■□□□□ 10.3
SF3B1-212ENST00000496458 SCAPQ12770 1279 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 TTF1Q15361 905 aaPredicted RBP7.39□□□□□ -1.23
SF3B1-212ENST00000496458 CYP2A13Q16696 494 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 GPR149Q86SP6 731 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 C3orf20Q8ND61 904 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 RGMAQ96B86 450 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 BOD1Q96IK1 185 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 KLHL32Q96NJ5 620 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 TMEM74BQ9NUR3 256 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 PACSIN3Q9UKS6 424 aa7.39□□□□□ -1.23
SF3B1-212ENST00000496458 ZFPL1O95159 310 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 CT47B1P0C2W7 299 aaPredicted RBP7.38□□□□□ -1.23
SF3B1-212ENST00000496458 HKR1P10072 659 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 PF4V1P10720 104 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 PROZP22891 400 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 SMARCA1P28370 1054 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 AVPR1BP47901 424 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 TAP1Q03518 808 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 GEN1Q17RS7 908 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 CRB2Q5IJ48 1285 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 PRR18Q8N4B5 295 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 TMIEQ8NEW7 156 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 CAVIN3Q969G5 261 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 MED15Q96RN5 788 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 GTPBP4Q9BZE4 634 aaKnown RBP7.38□□□□□ -1.23
SF3B1-212ENST00000496458 TCF7L1Q9HCS4 588 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 SYBUQ9NX95 663 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 POLHQ9Y253 713 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 PCDHA3Q9Y5H8 950 aa7.38□□□□□ -1.23
SF3B1-212ENST00000496458 NT5C1B-RDH14C9J2C7 533 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 SUV39H1O43463 412 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 RHOBTB3O94955 611 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 FTLP02792 175 aaPredicted RBP7.37□□□□□ -1.23
SF3B1-212ENST00000496458 VAV2P52735 878 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 MCL1Q07820 350 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 NOGQ13253 232 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 CCDC93Q567U6 631 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 THEMIS2Q5TEJ8 643 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 SLC44A3Q8N4M1 653 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 AOPEPQ8N6M6 819 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 GPR150Q8NGU9 434 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 IMPG2Q9BZV3 1241 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 TOR3AQ9H497 397 aa7.37□□□□□ -1.23
SF3B1-212ENST00000496458 ABLIM3O94929 683 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 VCAM1P19320 739 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 FDXRP22570 491 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 TGM1P22735 817 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 BLOC1S1P78537 153 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 COL10A1Q03692 680 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 PIN1Q13526 163 aaPredicted RBP7.36□□□□□ -1.23
SF3B1-212ENST00000496458 PGS1Q32NB8 556 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 SLC17A8Q8NDX2 589 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 LINC00476Q8WZB0 136 aa7.36□□□□□ -1.23
SF3B1-212ENST00000496458 COQ10AQ96MF6 247 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms