RNA–Protein interactions for RNA: ENST00000496116.1

CMSS1-208, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 1 (best)

Gene CMSS1, Length 2,145 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-208ENST00000496116 PSTPIP1O43586 416 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 PEX10O60683 326 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 PROSCO94903 275 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 NOMO3P69849 1222 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 C1QBPQ07021 282 aaKnown RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 PTP4A2Q12974 167 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 PTGISQ16647 500 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 LY6KQ17RY6 165 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 SYDE1Q6ZW31 735 aaPredicted RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 EEPD1Q7L9B9 569 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 PRRT2Q7Z6L0 340 aaPredicted RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 SPATS2Q86XZ4 545 aaKnown RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 PHF13Q86YI8 300 aaPredicted RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 RHOT1Q8IXI2 618 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 NLGN2Q8NFZ4 835 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 OR5B17Q8NGF7 314 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 ART4Q93070 314 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 JPH2Q9BR39 696 aaPredicted RBP11.8□□□□□ -0.52
CMSS1-208ENST00000496116 C11orf70Q9BRQ4 267 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 C2orf40Q9H1Z8 148 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 HOMER3Q9NSC5 361 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 NUB1Q9Y5A7 615 aa11.8□□□□□ -0.52
CMSS1-208ENST00000496116 OTOFQ9HC10 1997 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 IRF6O14896 467 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 MSCO60682 206 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 EDN1P05305 212 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 RARGP13631 454 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 KCNJ1P48048 391 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 MAPK6Q16659 721 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 CDCA2Q69YH5 1023 aaPredicted RBP11.79□□□□□ -0.52
CMSS1-208ENST00000496116 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.79□□□□□ -0.52
CMSS1-208ENST00000496116 PASD1Q8IV76 773 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 CNKSR2Q8WXI2 1034 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 RABEP2Q9H5N1 569 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 CNOT10Q9H9A5 744 aaKnown RBP11.79□□□□□ -0.52
CMSS1-208ENST00000496116 PARVAQ9NVD7 372 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 WHRNQ9P202 907 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 LCMT1Q9UIC8 334 aa11.79□□□□□ -0.52
CMSS1-208ENST00000496116 CXCL11O14625 94 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 GAS8O95995 478 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ASS1P00966 412 aaKnown RBP11.78□□□□□ -0.52
CMSS1-208ENST00000496116 PRKCBP05771 671 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 MAGOHP61326 146 aaKnown RBP11.78□□□□□ -0.52
CMSS1-208ENST00000496116 KRT17Q04695 432 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 LAMTOR4Q0VGL1 99 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 DRP2Q13474 957 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 MAMLD1Q13495 774 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 BYSLQ13895 437 aaKnown RBP11.78□□□□□ -0.52
CMSS1-208ENST00000496116 SEZ6Q53EL9 994 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 PLEKHA7Q6IQ23 1121 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 PLPPR4Q7Z2D5 763 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 PHLDB2Q86SQ0 1253 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ERO1BQ86YB8 467 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 CCDC50Q8IVM0 306 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 RNF149Q8NC42 400 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 C1orf54Q8WWF1 131 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 OTUD5Q96G74 571 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ACO2Q99798 780 aaKnown RBP11.78□□□□□ -0.52
CMSS1-208ENST00000496116 TRIM7Q9C029 511 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 CCDC113Q9H0I3 377 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ASCC2Q9H1I8 757 aaPredicted RBP11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ELP3Q9H9T3 547 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 SLC12A6Q9UHW9 1150 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 LRRC37A2A6NM11 1700 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 PAPPA2Q9BXP8 1791 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 OGTO15294 1046 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 TLR3O15455 904 aaKnown RBP11.78□□□□□ -0.52
CMSS1-208ENST00000496116 LGR5O75473 907 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 SRGAP2CP0DJJ0 459 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 MARK3P27448 753 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 CETN2P41208 172 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 CORO7P57737 925 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ADCY2Q08462 1091 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 TRPC3Q13507 836 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 SLC29A2Q14542 456 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 KCTD2Q14681 263 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 DUOXA2Q1HG44 320 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 SGSM1Q2NKQ1 1148 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 C2CD6Q53TS8 623 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 CELF3Q5SZQ8 465 aaKnown RBP11.78□□□□□ -0.52
CMSS1-208ENST00000496116 SMYD5Q6GMV2 418 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 MMS22LQ6ZRQ5 1243 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 MICALCLQ6ZW33 695 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ZBTB33Q86T24 672 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ANKRD13AQ8IZ07 590 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ZNF606Q8WXB4 792 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 PGM2Q96G03 612 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 GPR20Q99678 358 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 RASSF4Q9H2L5 321 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 EPB41L4BQ9H329 900 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 ASIC3Q9UHC3 531 aa11.78□□□□□ -0.52
CMSS1-208ENST00000496116 UMODL1Q5DID0 1318 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 ADM5C9JUS6 153 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 E7EVH7 732 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 LSM8O95777 96 aaKnown RBP11.77□□□□□ -0.52
CMSS1-208ENST00000496116 FAM107AO95990 144 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 CALB1P05937 261 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 ITIH2P19823 946 aa11.77□□□□□ -0.52
CMSS1-208ENST00000496116 NF2P35240 595 aa11.77□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms