RNA–Protein interactions for RNA: ENST00000495835.1

HLA-C-209, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,073 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-209ENST00000495835 DOCK8Q8NF50 2099 aa26.35■■□□□ 1.81
HLA-C-209ENST00000495835 FRMD3A2A2Y4 597 aa26.34■■□□□ 1.81
HLA-C-209ENST00000495835 M0QZQ0 153 aa26.34■■□□□ 1.81
HLA-C-209ENST00000495835 MCM4P33991 863 aa26.34■■□□□ 1.81
HLA-C-209ENST00000495835 TPGS2Q68CL5 300 aa26.34■■□□□ 1.81
HLA-C-209ENST00000495835 MRPL44Q9H9J2 332 aaKnown RBP26.34■■□□□ 1.81
HLA-C-209ENST00000495835 PCDHB8Q9UN66 801 aa26.34■■□□□ 1.81
HLA-C-209ENST00000495835 ZSCAN22P10073 491 aaPredicted RBP26.33■■□□□ 1.81
HLA-C-209ENST00000495835 ATF2P15336 505 aa26.33■■□□□ 1.81
HLA-C-209ENST00000495835 AARSP49588 968 aaKnown RBP eCLIP26.33■■□□□ 1.81
HLA-C-209ENST00000495835 NUBP1P53384 320 aa26.33■■□□□ 1.81
HLA-C-209ENST00000495835 SPATA1Q5VX52 437 aa26.33■■□□□ 1.81
HLA-C-209ENST00000495835 ADALQ6DHV7 355 aa26.33■■□□□ 1.81
HLA-C-209ENST00000495835 BEST2Q8NFU1 509 aa26.33■■□□□ 1.81
HLA-C-209ENST00000495835 SLC7A14Q8TBB6 771 aa26.33■■□□□ 1.81
HLA-C-209ENST00000495835 AGO2Q9UKV8 859 aaKnown RBP26.33■■□□□ 1.81
HLA-C-209ENST00000495835 ANKRD63C9JTQ0 380 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 CUTAO60888 179 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 LAMP2P13473 410 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 FSHRP23945 695 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 ROR1Q01973 937 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 ZNF280DQ6N043 979 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 GRASPQ7Z6J2 395 aaPredicted RBP26.32■■□□□ 1.8
HLA-C-209ENST00000495835 ACCSQ96QU6 501 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 MYADMQ96S97 322 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 PANK2Q9BZ23 570 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 TNMDQ9H2S6 317 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 TFIP11Q9UBB9 837 aaKnown RBP26.32■■□□□ 1.8
HLA-C-209ENST00000495835 DUSP12Q9UNI6 340 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 GTF3C3Q9Y5Q9 886 aa26.32■■□□□ 1.8
HLA-C-209ENST00000495835 A0A087X0B3 334 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 ARHGEF37A1IGU5 675 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 ELF1P32519 619 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 CTXN3Q4LDR2 81 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 ZBTB41Q5SVQ8 909 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 L1TD1Q5T7N2 865 aaKnown RBP26.31■■□□□ 1.8
HLA-C-209ENST00000495835 TCEAL8Q8IYN2 117 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 FBXL5Q9UKA1 691 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 KCNH3Q9ULD8 1083 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 C2CD2Q9Y426 696 aa26.31■■□□□ 1.8
HLA-C-209ENST00000495835 MUC6Q6W4X9 2439 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 OAZ2O95190 189 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 LDHAP00338 332 aaKnown RBP26.3■■□□□ 1.8
HLA-C-209ENST00000495835 F13A1P00488 732 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 AMPD3Q01432 767 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 SPAG1Q07617 926 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 NT5DC4Q86YG4 428 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 CCDC65Q8IXS2 484 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 KCNG4Q8TDN1 519 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 AVENQ9NQS1 362 aaPredicted RBP26.3■■□□□ 1.8
HLA-C-209ENST00000495835 PANK4Q9NVE7 773 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 ZDBF2Q9HCK1 2354 aa26.3■■□□□ 1.8
HLA-C-209ENST00000495835 WDR27A2RRH5 827 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 CCL16O15467 120 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 IDEP14735 1019 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 JADE1Q6IE81 842 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 GET4Q7L5D6 327 aaPredicted RBP26.29■■□□□ 1.8
HLA-C-209ENST00000495835 PDILTQ8N807 584 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 IQUBQ8NA54 791 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 POMGNT1Q8WZA1 660 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 KBTBD4Q9NVX7 518 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 CFAP45Q9UL16 551 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 CDH7Q9ULB5 785 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 ANK1P16157 1881 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 DOCK6Q96HP0 2047 aa26.29■■□□□ 1.8
HLA-C-209ENST00000495835 KMT2EQ8IZD2 1858 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 ANHXE9PGG2 379 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 IL18RAPO95256 599 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 GCNT3O95395 438 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 TYMPP19971 482 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 AVPR2P30518 371 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 ACOT2P49753 483 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 YWHAHQ04917 246 aaPredicted RBP26.28■■□□□ 1.8
HLA-C-209ENST00000495835 TMEM132DQ14C87 1099 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 E2F4Q16254 413 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 CNNM4Q6P4Q7 775 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 SLC44A3Q8N4M1 653 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 FAM212AQ96EL1 285 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 TMEM206Q9H813 350 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 AFF4Q9UHB7 1163 aaKnown RBP26.28■■□□□ 1.8
HLA-C-209ENST00000495835 POLIQ9UNA4 740 aa26.28■■□□□ 1.8
HLA-C-209ENST00000495835 PIRO00625 290 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 LRG1P02750 347 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 GARTP22102 1010 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 ADSSP30520 456 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 LILRA4P59901 499 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 DSTYKQ6XUX3 929 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 STXBP4Q6ZWJ1 553 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 MAGEF1Q9HAY2 307 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 DNMT3BQ9UBC3 853 aaKnown RBP26.27■■□□□ 1.8
HLA-C-209ENST00000495835 WNT16Q9UBV4 365 aa26.27■■□□□ 1.8
HLA-C-209ENST00000495835 ANO9A1A5B4 782 aa26.26■■□□□ 1.79
HLA-C-209ENST00000495835 TISP43B9A030 160 aa26.26■■□□□ 1.79
HLA-C-209ENST00000495835 PRRG1O14668 218 aa26.26■■□□□ 1.79
HLA-C-209ENST00000495835 PTPN2P17706 415 aa26.26■■□□□ 1.79
HLA-C-209ENST00000495835 PABPC1LQ4VXU2 614 aaKnown RBP26.26■■□□□ 1.79
HLA-C-209ENST00000495835 C9orf57Q5W0N0 161 aa26.26■■□□□ 1.79
HLA-C-209ENST00000495835 CRELD2Q6UXH1 353 aaPredicted RBP26.26■■□□□ 1.79
HLA-C-209ENST00000495835 USP37Q86T82 979 aa26.26■■□□□ 1.79
HLA-C-209ENST00000495835 SMOC2Q9H3U7 446 aa26.26■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms