RNA–Protein interactions for RNA: ENST00000495777.5

SORT1-208, Transcript of sortilin 1, humanhuman

TSL 2

Gene SORT1, Length 391 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-208ENST00000495777 POLD4Q9HCU8 107 aa9.63□□□□□ -0.87
SORT1-208ENST00000495777 HEBP1Q9NRV9 189 aa9.63□□□□□ -0.87
SORT1-208ENST00000495777 CNTN3Q9P232 1028 aa9.63□□□□□ -0.87
SORT1-208ENST00000495777 ARHGAP28Q9P2N2 729 aa9.63□□□□□ -0.87
SORT1-208ENST00000495777 MAFFQ9ULX9 164 aa9.63□□□□□ -0.87
SORT1-208ENST00000495777 SMG5Q9UPR3 1016 aaKnown RBP9.63□□□□□ -0.87
SORT1-208ENST00000495777 MRPS17Q9Y2R5 130 aaKnown RBP9.63□□□□□ -0.87
SORT1-208ENST00000495777 MORC2Q9Y6X9 1032 aaPredicted RBP9.63□□□□□ -0.87
SORT1-208ENST00000495777 NOTCH4Q99466 2003 aa9.63□□□□□ -0.87
SORT1-208ENST00000495777 VWA8A3KMH1 1905 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 TCHHQ07283 1943 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 PODXLO00592 558 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 NRG2O14511 850 aaPredicted RBP9.62□□□□□ -0.87
SORT1-208ENST00000495777 ZNF197O14709 1029 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 MOSPD3O75425 235 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 SEC24AO95486 1093 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 LRG1P02750 347 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 MCF2P10911 925 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 SDHBP21912 280 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 TGM1P22735 817 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 RPL9P32969 192 aaKnown RBP9.62□□□□□ -0.87
SORT1-208ENST00000495777 CCT6AP40227 531 aaKnown RBP9.62□□□□□ -0.87
SORT1-208ENST00000495777 CCR2P41597 374 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 NPTX2P47972 431 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 YARSP54577 528 aaKnown RBP9.62□□□□□ -0.87
SORT1-208ENST00000495777 EPHA5P54756 1037 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 KRT85P78386 507 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 MTAPQ13126 283 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 RESTQ13127 1097 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 MAPK7Q13164 816 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 PDIA5Q14554 519 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 ZNF174Q15697 407 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 RSPO4Q2I0M5 234 aaPredicted RBP9.62□□□□□ -0.87
SORT1-208ENST00000495777 ZNF568Q3ZCX4 644 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 FAM78AQ5JUQ0 283 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 TTC38Q5R3I4 469 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 TPGS2Q68CL5 300 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 MAP4K3Q8IVH8 894 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 IGSF22Q8N9C0 903 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 TCEAL4Q96EI5 215 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 SUSD3Q96L08 255 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 IER2Q9BTL4 223 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 MRPL4Q9BYD3 311 aaKnown RBP9.62□□□□□ -0.87
SORT1-208ENST00000495777 SCAND2PQ9GZW5 306 aaPredicted RBP9.62□□□□□ -0.87
SORT1-208ENST00000495777 CHRDQ9H2X0 955 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 TRPV4Q9HBA0 871 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 NCDNQ9UBB6 729 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 FBXL5Q9UKA1 691 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 KIAA1024Q9UPX6 916 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 INSL5Q9Y5Q6 135 aa9.62□□□□□ -0.87
SORT1-208ENST00000495777 H7C4K7 107 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 ARNTLO00327 626 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 MAN2B1O00754 1011 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 PRRG1O14668 218 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 YEATS4O95619 227 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 ELF1P32519 619 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 PEX3P56589 373 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 ARL6IP4Q66PJ3 421 aaKnown RBP9.61□□□□□ -0.87
SORT1-208ENST00000495777 TSSK4Q6SA08 328 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 MPZL3Q6UWV2 235 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 VITQ6UXI7 678 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 LEMD2Q8NC56 503 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 BEST2Q8NFU1 509 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 SMARCD2Q92925 531 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 ZSWIM3Q96MP5 696 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 ACAP3Q96P50 834 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 GBP4Q96PP9 640 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 CORO1BQ9BR76 489 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 NTPCRQ9BSD7 190 aaKnown RBP9.61□□□□□ -0.87
SORT1-208ENST00000495777 TRMT61BQ9BVS5 477 aaKnown RBP9.61□□□□□ -0.87
SORT1-208ENST00000495777 TARS2Q9BW92 718 aaKnown RBP9.61□□□□□ -0.87
SORT1-208ENST00000495777 RAB34Q9BZG1 259 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 C17orf75Q9HAS0 396 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 CYP4F11Q9HBI6 524 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 ZFP14Q9HCL3 533 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 ZNF334Q9HCZ1 680 aaPredicted RBP9.61□□□□□ -0.87
SORT1-208ENST00000495777 DDX19AQ9NUU7 478 aaKnown RBP9.61□□□□□ -0.87
SORT1-208ENST00000495777 CEP72Q9P209 647 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 LRWD1Q9UFC0 647 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 AFF4Q9UHB7 1163 aaKnown RBP9.61□□□□□ -0.87
SORT1-208ENST00000495777 STK24Q9Y6E0 443 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 DOCK6Q96HP0 2047 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 PATJQ8NI35 1801 aa9.61□□□□□ -0.87
SORT1-208ENST00000495777 NCANO14594 1321 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 CCDC169A6NNP5 214 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 PRR5-ARHGAP8B1AHC4 643 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 GOLGA6L22H0YM25 854 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 HIP1RO75146 1068 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 PSMC3P17980 439 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 PRPHP41219 470 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 MLLT6P55198 1093 aaPredicted RBP9.6□□□□□ -0.87
SORT1-208ENST00000495777 OSTNP61366 133 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 ARHGAP8P85298 464 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 LMNB2Q03252 620 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 DMP1Q13316 513 aaPredicted RBP9.6□□□□□ -0.87
SORT1-208ENST00000495777 GRM2Q14416 872 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 SLC10A6Q3KNW5 377 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 ZNF280DQ6N043 979 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 CLEC17AQ6ZS10 378 aa9.6□□□□□ -0.87
SORT1-208ENST00000495777 C1orf186Q6ZWK4 172 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms