RNA–Protein interactions for RNA: ENST00000494610.1

CSNK1E-212, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 539 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-212ENST00000494610 USP18Q9UMW8 372 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 PCDHA12Q9UN75 941 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 MRPS23Q9Y3D9 190 aaKnown RBP12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 ZFP37Q9Y6Q3 630 aaPredicted RBP12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 NCANO14594 1321 aa12.87□□□□□ -0.35
CSNK1E-212ENST00000494610 LILRB5O75023 590 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 XYLBO75191 536 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 GADD45BO75293 160 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 MED24O75448 989 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 LETM1O95202 739 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 LYPLA2O95372 231 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 C1RP00736 705 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 RHOP08100 348 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 PFKFB1P16118 471 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 GJA1P17302 382 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 FGFR3P22607 806 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 SYKP43405 635 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 ARPP19P56211 112 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 CREMQ03060 361 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 SOX4Q06945 474 aaPredicted RBP12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 DMWDQ09019 674 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 SPEM2Q0P670 501 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 SRSF5Q13243 272 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 RAB33AQ14088 237 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 PCBP1Q15365 356 aaKnown RBP eCLIP12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 CCDC183Q5T5S1 534 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 GPIHBP1Q8IV16 184 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 CEP120Q8N960 986 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 IGSF22Q8N9C0 903 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 NELL1Q92832 810 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 CLDN23Q96B33 292 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 CALML4Q96GE6 196 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 DDX27Q96GQ7 796 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 CDK5RAP3Q96JB5 506 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 ZSWIM3Q96MP5 696 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 TIGD1Q96MW7 591 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 NFKBIZQ9BYH8 718 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 CCSER1Q9C0I3 900 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 EPC1Q9H2F5 836 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 CUEDC2Q9H467 287 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 ZSCAN32Q9NX65 697 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 MTRRQ9UBK8 725 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 LRWD1Q9UFC0 647 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 PCDHGA2Q9Y5H1 932 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 TICRRQ7Z2Z1 1910 aa12.86□□□□□ -0.35
CSNK1E-212ENST00000494610 SDK1Q7Z5N4 2213 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 ZZEF1O43149 2961 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 CACNA1GO43497 2377 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 SPTLC1O15269 473 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 B3GAT3O94766 335 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 SEC24AO95486 1093 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 TDGF1P13385 188 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 HOXA9P31269 272 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 PRPF4BQ13523 1007 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 TMEM132AQ24JP5 1023 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 FAM78AQ5JUQ0 283 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 CDCA2Q69YH5 1023 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 SHC4Q6S5L8 630 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 PPP4R3CPQ6ZMV5 832 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 CATSPER3Q86XQ3 398 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 HS6ST3Q8IZP7 471 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 GPT2Q8TD30 523 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 CCDC43Q96MW1 224 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 CORO1BQ9BR76 489 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 CCDC113Q9H0I3 377 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 NUP62CLQ9H1M0 184 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 PRMT8Q9NR22 394 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 PRMT7Q9NVM4 692 aaPredicted RBP12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 RALYQ9UKM9 306 aaKnown RBP12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 KCNH3Q9ULD8 1083 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 HPSEQ9Y251 543 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 WDFY3Q8IZQ1 3526 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 CEP295Q9C0D2 2601 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 COL4A2P08572 1712 aa12.85□□□□□ -0.35
CSNK1E-212ENST00000494610 PRKCBP05771 671 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 MUTP22033 750 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 VIPR2P41587 438 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 OSTNP61366 133 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 PFKPQ01813 784 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 ROR1Q01973 937 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 NT5DC1Q5TFE4 455 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 ZNF852Q6ZMS4 543 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 ELOA2Q8IYF1 753 aaPredicted RBP12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 CEP57L1Q8IYX8 460 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 IQUBQ8NA54 791 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 CLIC6Q96NY7 704 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 PPP1R10Q96QC0 940 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 OSBPL6Q9BZF3 934 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 C2orf42Q9NWW7 574 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 STK17AQ9UEE5 414 aa12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 CDV3Q9UKY7 258 aaKnown RBP12.84□□□□□ -0.35
CSNK1E-212ENST00000494610 A0A1B0GVL5 298 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 WDR27A2RRH5 827 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 N4BP3O15049 544 aa12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 MEFVO15553 781 aaPredicted RBP12.83□□□□□ -0.36
CSNK1E-212ENST00000494610 GDF9O60383 454 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms