RNA–Protein interactions for RNA: ENST00000494426.1

CLIC3-203, Transcript of chloride intracellular channel 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIC3, Length 1,017 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC3-203ENST00000494426 MSLNLQ96KJ4 702 aa25.39■■□□□ 1.66
CLIC3-203ENST00000494426 FAM84AQ96KN4 292 aa25.39■■□□□ 1.66
CLIC3-203ENST00000494426 RMND1Q9NWS8 449 aa25.39■■□□□ 1.66
CLIC3-203ENST00000494426 DPP3Q9NY33 737 aa25.39■■□□□ 1.66
CLIC3-203ENST00000494426 TRAF3IP3Q9Y228 551 aa25.39■■□□□ 1.66
CLIC3-203ENST00000494426 FSD2A1L4K1 749 aa25.38■■□□□ 1.65
CLIC3-203ENST00000494426 TRAPPC3O43617 180 aa25.38■■□□□ 1.65
CLIC3-203ENST00000494426 NDUFV1P49821 464 aa25.38■■□□□ 1.65
CLIC3-203ENST00000494426 SNRNP35Q16560 246 aaKnown RBP25.38■■□□□ 1.65
CLIC3-203ENST00000494426 ZNF658Q5TYW1 1059 aaPredicted RBP25.38■■□□□ 1.65
CLIC3-203ENST00000494426 SCARA3Q6AZY7 606 aa25.38■■□□□ 1.65
CLIC3-203ENST00000494426 SLC9A9Q8IVB4 645 aa25.38■■□□□ 1.65
CLIC3-203ENST00000494426 FNIP2Q9P278 1114 aa25.38■■□□□ 1.65
CLIC3-203ENST00000494426 NUB1Q9Y5A7 615 aa25.38■■□□□ 1.65
CLIC3-203ENST00000494426 SCN1AP35498 2009 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 KIF20AO95235 890 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 EPCAMP16422 314 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 RPL17P18621 184 aaKnown RBP25.37■■□□□ 1.65
CLIC3-203ENST00000494426 KLRC2P26717 231 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 MCM4P33991 863 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 AARSP49588 968 aaKnown RBP eCLIP25.37■■□□□ 1.65
CLIC3-203ENST00000494426 CLCN4P51793 760 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 SUSD3Q96L08 255 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP25.37■■□□□ 1.65
CLIC3-203ENST00000494426 LMBRD1Q9NUN5 540 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 MAN1B1Q9UKM7 699 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 PTPRJQ12913 1337 aa25.37■■□□□ 1.65
CLIC3-203ENST00000494426 TULP1O00294 542 aaPredicted RBP25.36■■□□□ 1.65
CLIC3-203ENST00000494426 SPTLC1O15269 473 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 BMP1P13497 986 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 PRCPP42785 496 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 TFAMQ00059 246 aaKnown RBP25.36■■□□□ 1.65
CLIC3-203ENST00000494426 CLUL1Q15846 466 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 PSMD5Q16401 504 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 AAK1Q2M2I8 961 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 COBLL1Q53SF7 1204 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 CXorf38Q8TB03 319 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 MFSD14AQ96MC6 490 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 CLSTN3Q9BQT9 956 aa25.36■■□□□ 1.65
CLIC3-203ENST00000494426 GZF1Q9H116 711 aaPredicted RBP25.36■■□□□ 1.65
CLIC3-203ENST00000494426 M0QZQ0 153 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 EXOC3O60645 756 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 NR3C1P04150 777 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 LILRA4P59901 499 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 CYP24A1Q07973 514 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 MYBPC2Q14324 1141 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 PSMD6Q15008 389 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 ZCWPW2Q504Y3 356 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 LMBRD2Q68DH5 695 aaPredicted RBP25.35■■□□□ 1.65
CLIC3-203ENST00000494426 ISM2Q6H9L7 571 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 ANKRD54Q6NXT1 300 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 SYCE2Q6PIF2 218 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 RSPO2Q6UXX9 243 aaPredicted RBP25.35■■□□□ 1.65
CLIC3-203ENST00000494426 PPFIBP1Q86W92 1011 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 C1orf127Q8N9H9 656 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 OR5B17Q8NGF7 314 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 PLEKHO2Q8TD55 490 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 CASP10Q92851 521 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 INTS13Q9NVM9 706 aa25.35■■□□□ 1.65
CLIC3-203ENST00000494426 SYN3O14994 580 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 ADAM12O43184 909 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 CALUO43852 315 aaPredicted RBP25.34■■□□□ 1.65
CLIC3-203ENST00000494426 ADH1AP07327 375 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 CASP4P49662 377 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 MRPL58Q14197 206 aaKnown RBP25.34■■□□□ 1.65
CLIC3-203ENST00000494426 SURF1Q15526 300 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 NFIL3Q16649 462 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 GLYCTKQ8IVS8 523 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 CACTINQ8WUQ7 758 aaKnown RBP25.34■■□□□ 1.65
CLIC3-203ENST00000494426 BORCS6Q96GS4 357 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 MTRRQ9UBK8 725 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 CD207Q9UJ71 328 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 PCDHB8Q9UN66 801 aa25.34■■□□□ 1.65
CLIC3-203ENST00000494426 TCF20Q9UGU0 1960 aaKnown RBP25.34■■□□□ 1.65
CLIC3-203ENST00000494426 BMP6P22004 513 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 CREMQ03060 361 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 TJAP1Q5JTD0 557 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 VARS2Q5ST30 1063 aaKnown RBP25.33■■□□□ 1.65
CLIC3-203ENST00000494426 PDXDC1Q6P996 788 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 LILRA6Q6PI73 481 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 PALB2Q86YC2 1186 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 POP1Q99575 1024 aaKnown RBP25.33■■□□□ 1.65
CLIC3-203ENST00000494426 MTMR12Q9C0I1 747 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 S1PR5Q9H228 398 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 BACE2Q9Y5Z0 518 aa25.33■■□□□ 1.65
CLIC3-203ENST00000494426 MTCL1Q9Y4B5 1905 aaKnown RBP25.33■■□□□ 1.65
CLIC3-203ENST00000494426 GRXCR2A6NFK2 248 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 MBTPS2O43462 519 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 TBC1D4O60343 1298 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 ITGB3P05106 788 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 SRGAP2BP0DMP2 458 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 CAMK4Q16566 473 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 PTCRAQ6ISU1 281 aaPredicted RBP25.32■■□□□ 1.64
CLIC3-203ENST00000494426 ANKS3Q6ZW76 656 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 ADSSL1Q8N142 457 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 CCDC127Q96BQ5 260 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 GBP4Q96PP9 640 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 SIX4Q9UIU6 781 aa25.32■■□□□ 1.64
CLIC3-203ENST00000494426 IL9P15248 144 aa25.31■■□□□ 1.64
CLIC3-203ENST00000494426 CD44P16070 742 aaKnown RBP25.31■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms