RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 SLC35B2Q8TB61 432 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 IFI44Q8TCB0 444 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 PROKR1Q8TCW9 393 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 MORC4Q8TE76 937 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 CACTINQ8WUQ7 758 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 EXTL1Q92935 676 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 TSR2Q969E8 191 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 HPS3Q969F9 1004 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 RGMAQ96B86 450 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 C1GALT1C1Q96EU7 318 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 MYEOVQ96EZ4 313 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 ZNF503Q96F45 646 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 CDK5RAP3Q96JB5 506 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 PHACTR3Q96KR7 559 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 MOGAT1Q96PD6 335 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 HEPHQ9BQS7 1158 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 LSM14BQ9BX40 385 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 SLC12A5Q9H2X9 1139 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 SARS2Q9NP81 518 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 GABBR1Q9UBS5 961 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 TESQ9UGI8 421 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 KCNE5Q9UJ90 142 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 RUVBL1Q9Y265 456 aaKnown RBP3.01□□□□□ -1.93
LMNB1-207ENST00000494185 PCDHB1Q9Y5F3 818 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 ACTL7AQ9Y615 435 aa3.01□□□□□ -1.93
LMNB1-207ENST00000494185 ERC2O15083 957 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 B3GALT2O43825 422 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 EIF5BO60841 1220 aaKnown RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 FAM20BO75063 409 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 PPFIA2O75334 1257 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 CDKL5O76039 1030 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 GPANK1O95872 356 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 CD1AP06126 327 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 ATF3P18847 181 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 LPOP22079 712 aaPredicted RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 APOBEC3AP31941 199 aaPredicted RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 GNALP38405 381 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 DSC2Q02487 901 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 TLE1Q04724 770 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 HABP2Q14520 560 aaPredicted RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 ZNF267Q14586 743 aaPredicted RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 UBXN2BQ14CS0 331 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 CDSNQ15517 529 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 GFOD2Q3B7J2 385 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 SLC44A4Q53GD3 710 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 TEDDM1Q5T9Z0 273 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 ABHD17BQ5VST6 288 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 MED25Q71SY5 747 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 EPM2AIP1Q7L775 607 aaPredicted RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 PDSS2Q86YH6 399 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 EXOC8Q8IYI6 725 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 RNF169Q8NCN4 708 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 SLC35G2Q8TBE7 412 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 DIS3LQ8TF46 1054 aaKnown RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 NELL1Q92832 810 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 MRGPRX4Q96LA9 322 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 ZNF747Q9BV97 191 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 CPEB1Q9BZB8 566 aaKnown RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 FAM204AQ9H8W3 233 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 GALNT9Q9HCQ5 603 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 AKIP1Q9NQ31 210 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 ZDHHC8Q9ULC8 765 aa3□□□□□ -1.93
LMNB1-207ENST00000494185 USP15Q9Y4E8 981 aaPredicted RBP3□□□□□ -1.93
LMNB1-207ENST00000494185 UTP18Q9Y5J1 556 aaKnown RBP eCLIP3□□□□□ -1.93
LMNB1-207ENST00000494185 DRGXA6NNA5 263 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 NPIPB8E9PQR5 432 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 H3BML4 177 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 WNT10BO00744 389 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 PRPF3O43395 683 aaKnown RBP2.99□□□□□ -1.93
LMNB1-207ENST00000494185 CTNND1O60716 968 aaKnown RBP2.99□□□□□ -1.93
LMNB1-207ENST00000494185 RAMP2O60895 175 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 CAND2O75155 1236 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 PEX14O75381 377 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 C1SP09871 688 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 HKR1P10072 659 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 CKBP12277 381 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 MALP21145 153 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 FDXRP22570 491 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 PIK3CGP48736 1102 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 FXR1P51114 621 aaKnown RBP eCLIP2.99□□□□□ -1.93
LMNB1-207ENST00000494185 MAP2K6P52564 334 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 CHN2P52757 468 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 HK3P52790 923 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 RHBDL3P58872 404 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 ZNF280AP59817 542 aaPredicted RBP2.99□□□□□ -1.93
LMNB1-207ENST00000494185 RNASE9P60153 205 aaKnown RBP2.99□□□□□ -1.93
LMNB1-207ENST00000494185 NOGQ13253 232 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 KHDC1Q4VXA5 237 aaKnown RBP2.99□□□□□ -1.93
LMNB1-207ENST00000494185 ARHGAP29Q52LW3 1261 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 AGAP9Q5VTM2 703 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 SLC4A10Q6U841 1118 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 B3GNT9Q6UX72 402 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 ZNF365Q70YC5 407 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 UBE3BQ7Z3V4 1068 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 CLNKQ7Z7G1 428 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 MRGPRGQ86SM5 289 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 DAAM2Q86T65 1068 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 DENND1CQ8IV53 801 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 MAPKAPK5Q8IW41 473 aa2.99□□□□□ -1.93
LMNB1-207ENST00000494185 SMC5Q8IY18 1101 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms