RNA–Protein interactions for RNA: ENST00000493945.5

ACTB-213, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 1,236 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-213ENST00000493945 GBF1Q92538 1859 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 TADA2AO75478 443 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 STAU1O95793 577 aaKnown RBP16.05■□□□□ 0.16
ACTB-213ENST00000493945 HLA-DRAP01903 254 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 C4BPAP04003 597 aaKnown RBP16.05■□□□□ 0.16
ACTB-213ENST00000493945 TPM1P09493 284 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 TBXAS1P24557 533 aaPredicted RBP16.05■□□□□ 0.16
ACTB-213ENST00000493945 GATMP50440 423 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 SMAD3P84022 425 aaKnown RBP16.05■□□□□ 0.16
ACTB-213ENST00000493945 PPP3CAQ08209 521 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 ZNF667Q5HYK9 610 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 PDXDC1Q6P996 788 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 KCNT2Q6UVM3 1135 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 FMNL3Q8IVF7 1028 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 OR5B17Q8NGF7 314 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 PLEKHO2Q8TD55 490 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 C18orf25Q96B23 403 aaPredicted RBP16.05■□□□□ 0.16
ACTB-213ENST00000493945 HPDLQ96IR7 371 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 NT5C1BQ96P26 610 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 FAM124BQ9H5Z6 455 aaPredicted RBP16.05■□□□□ 0.16
ACTB-213ENST00000493945 NRDE2Q9H7Z3 1164 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 SLC28A3Q9HAS3 691 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 SPG21Q9NZD8 308 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 PUF60Q9UHX1 559 aaKnown RBP16.05■□□□□ 0.16
ACTB-213ENST00000493945 PLAGL2Q9UPG8 496 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 COQ4Q9Y3A0 265 aa16.05■□□□□ 0.16
ACTB-213ENST00000493945 A0A1B0GTH6 734 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 GOLGA6L6A8MZA4 724 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 RB1P06400 928 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 ODC1P11926 461 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 ATP1A3P13637 1013 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 CTNNB1P35222 781 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 CLCNKBP51801 687 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 BCAR1P56945 870 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 UPP1Q16831 310 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 PPP2R2DQ66LE6 453 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 SMYD5Q6GMV2 418 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 SARM1Q6SZW1 724 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 DSTYKQ6XUX3 929 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 C15orf39Q6ZRI6 1047 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 METTL23Q86XA0 190 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 COLGALT1Q8NBJ5 622 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 SPATA18Q8TC71 538 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 CLP1Q92989 425 aaKnown RBP16.04■□□□□ 0.16
ACTB-213ENST00000493945 TGS1Q96RS0 853 aaKnown RBP16.04■□□□□ 0.16
ACTB-213ENST00000493945 C11orf84Q9BUA3 381 aaPredicted RBP16.04■□□□□ 0.16
ACTB-213ENST00000493945 TRIM5Q9C035 493 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 RBSNQ9H1K0 784 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 HSD3B7Q9H2F3 369 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 MIOSQ9NXC5 875 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 ADAM28Q9UKQ2 775 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 SSX2IPQ9Y2D8 614 aa16.04■□□□□ 0.16
ACTB-213ENST00000493945 PRG3Q9Y2Y8 225 aaPredicted RBP16.04■□□□□ 0.16
ACTB-213ENST00000493945 MRPL42Q9Y6G3 142 aaKnown RBP16.04■□□□□ 0.16
ACTB-213ENST00000493945 KIAA1671Q9BY89 1806 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 PTPRJQ12913 1337 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 ANO9A1A5B4 782 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 PIRO00625 290 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 NRP1O14786 923 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 HUS1O60921 280 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 DDHD2O94830 711 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 GALTP07902 379 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 WNT7BP56706 349 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 NOP14P78316 857 aaKnown RBP16.03■□□□□ 0.16
ACTB-213ENST00000493945 NAB2Q15742 525 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 CBWD6Q4V339 395 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 CBWD3Q5JTY5 395 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 MIIPQ5JXC2 388 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 CBWD5Q5RIA9 395 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 ENOSF1Q7L5Y1 443 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 TMCO2Q7Z6W1 182 aaPredicted RBP16.03■□□□□ 0.16
ACTB-213ENST00000493945 ZNF280BQ86YH2 543 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 APPL2Q8NEU8 664 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 CWH43Q9H720 699 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 VRTNQ9H8Y1 702 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 GOLGA2P5Q9HBQ8 144 aa16.03■□□□□ 0.16
ACTB-213ENST00000493945 TMEM265A0A087WTH1 108 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 A0A1W2PQC6 194 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 KPNA7A9QM74 516 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 MEFVO15553 781 aaPredicted RBP16.02■□□□□ 0.16
ACTB-213ENST00000493945 LPXNO60711 386 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 ASS1P00966 412 aaKnown RBP16.02■□□□□ 0.16
ACTB-213ENST00000493945 CA3P07451 260 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 SLC11A1P49279 550 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 AFF1P51825 1210 aaKnown RBP16.02■□□□□ 0.16
ACTB-213ENST00000493945 CREMQ03060 361 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 UBE3AQ05086 875 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 SOX4Q06945 474 aaPredicted RBP16.02■□□□□ 0.16
ACTB-213ENST00000493945 TRIM14Q14142 442 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 WDR72Q3MJ13 1102 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 LRIT3Q3SXY7 679 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 EPC2Q52LR7 807 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 C1orf220Q5T0J3 134 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 DPH6Q7L8W6 267 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 GAS2L3Q86XJ1 694 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 TMEM86AQ8N2M4 240 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 NEK11Q8NG66 645 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 TAS1R2Q8TE23 839 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 ZNF516Q92618 1163 aa16.02■□□□□ 0.16
ACTB-213ENST00000493945 ERGIC2Q96RQ1 377 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms