RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 OR5B17Q8NGF7 314 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 WHAMMQ8TF30 809 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 KRT35Q92764 455 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 ATP6V1G3Q96LB4 118 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 NAP1L3Q99457 506 aaPredicted RBP14.71□□□□□ -0.06
VCP-207ENST00000493886 PAIP2Q9BPZ3 127 aaKnown RBP14.71□□□□□ -0.06
VCP-207ENST00000493886 ZSWIM1Q9BR11 485 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 TRIM51Q9BSJ1 452 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 SLC24A3Q9HC58 644 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 LRRC4CQ9HCJ2 640 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 UVRAGQ9P2Y5 699 aa14.71□□□□□ -0.06
VCP-207ENST00000493886 TOM1L1O75674 476 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 CYP2C8P10632 490 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 BPIFB4P59827 614 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 CUL2Q13617 745 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 ZBTB33Q86T24 672 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 ZNF677Q86XU0 584 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 BRSK2Q8IWQ3 736 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 ZBTB8OSQ8IWT0 167 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 CCDC26Q8TAB7 109 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 TCHPQ9BT92 498 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 PDGFCQ9NRA1 345 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 A0A087WUV0 522 aaPredicted RBP14.7□□□□□ -0.06
VCP-207ENST00000493886 GOLGA6L10A6NI86 522 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 BHMG1C9JSJ3 638 aaPredicted RBP14.7□□□□□ -0.06
VCP-207ENST00000493886 PRKCBP05771 671 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 UNGP13051 313 aaPredicted RBP14.7□□□□□ -0.06
VCP-207ENST00000493886 ACO1P21399 889 aaKnown RBP14.7□□□□□ -0.06
VCP-207ENST00000493886 TNFSF9P41273 254 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 MARCKSL1P49006 195 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 SF3A3Q12874 501 aaKnown RBP eCLIP14.7□□□□□ -0.062e-6■■■□□ 15.5
VCP-207ENST00000493886 TTLL4Q14679 1199 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 C11orf91Q3C1V1 193 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 EIF1ADQ8N9N8 165 aaKnown RBP14.7□□□□□ -0.06
VCP-207ENST00000493886 SLC10A4Q96EP9 437 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 BTBD6Q96KE9 485 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 ACO2Q99798 780 aaKnown RBP14.7□□□□□ -0.06
VCP-207ENST00000493886 SMARCAD1Q9H4L7 1026 aa14.7□□□□□ -0.06
VCP-207ENST00000493886 CNOT8Q9UFF9 292 aaKnown RBP14.7□□□□□ -0.06
VCP-207ENST00000493886 ASB14A6NK59 587 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 E7EVH7 732 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 CUL1Q13616 776 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 MAPK6Q16659 721 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 KDM7AQ6ZMT4 941 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 TRAPPC12Q8WVT3 735 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 WNT8AQ9H1J5 351 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 PNMA3Q9UL41 463 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 FAM189A1O60320 539 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 CLTAP09496 248 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 TMOD1P28289 359 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 SLC26A2P50443 739 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 NOP14P78316 857 aaKnown RBP14.69□□□□□ -0.06
VCP-207ENST00000493886 CLUL1Q15846 466 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 RHPN2Q8IUC4 686 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.69□□□□□ -0.06
VCP-207ENST00000493886 CD101Q93033 1021 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 JPH2Q9BR39 696 aaPredicted RBP14.69□□□□□ -0.06
VCP-207ENST00000493886 DCDC2CA8MYV0 355 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 HSPA9P38646 679 aaKnown RBP14.69□□□□□ -0.06
VCP-207ENST00000493886 PEX5P50542 639 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 POU5F1Q01860 360 aaKnown RBP14.69□□□□□ -0.06
VCP-207ENST00000493886 NCOA4Q13772 614 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 ODF2Q5BJF6 829 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 MFSD4BQ5TF39 518 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 ARMC3Q5W041 872 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 AADACL2Q6P093 401 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 ARMCX2Q7L311 632 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 MREGQ8N565 214 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 C2orf40Q9H1Z8 148 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 NUB1Q9Y5A7 615 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 PCDHB4Q9Y5E5 795 aa14.69□□□□□ -0.06
VCP-207ENST00000493886 GOLGA6L10A0A0M3HER8 536 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 GLTPD2A6NH11 291 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 SPOPO43791 374 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 HBP1O60381 514 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 MYZAPP0CAP1 466 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 TBXAS1P24557 533 aaPredicted RBP14.68□□□□□ -0.06
VCP-207ENST00000493886 PTENP60484 403 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 PPP2R5EQ16537 467 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 RNF187Q5TA31 235 aaPredicted RBP14.68□□□□□ -0.06
VCP-207ENST00000493886 CPNE8Q86YQ8 564 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 MCOLN2Q8IZK6 566 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 KDM4CQ9H3R0 1056 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 UMODL1Q5DID0 1318 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 OGTO15294 1046 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 AP3M2P53677 418 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 MCL1Q07820 350 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 TMEM270Q6UE05 265 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 TSHZ1Q6ZSZ6 1077 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 WDR49Q8IV35 697 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 GPRC5AQ8NFJ5 357 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 GTF3C2Q8WUA4 911 aaPredicted RBP14.68□□□□□ -0.06
VCP-207ENST00000493886 CPA5Q8WXQ8 436 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 ERVK-5Q9HDB9 667 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 CAPN7Q9Y6W3 813 aa14.68□□□□□ -0.06
VCP-207ENST00000493886 ABLIM1O14639 778 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 KIAA0754O94854 1291 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 ECEL1O95672 775 aa14.67□□□□□ -0.06
VCP-207ENST00000493886 CYP1A1P04798 512 aaPredicted RBP14.67□□□□□ -0.06
VCP-207ENST00000493886 GJB1P08034 283 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms