RNA–Protein interactions for RNA: ENST00000493683.5

RNF40-203, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 5,371 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-203ENST00000493683 MPP6Q9NZW5 540 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 COPG1Q9Y678 874 aaKnown RBP21.11■□□□□ 0.97
RNF40-203ENST00000493683 ADCY10Q96PN6 1610 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 TRAPPC3O43617 180 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 C21orf2O43822 256 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 ACADSBP45954 432 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 SESN2P58004 480 aaPredicted RBP21.11■□□□□ 0.97
RNF40-203ENST00000493683 HOMEZQ8IX15 550 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 TRIM51Q9BSJ1 452 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 ADNPQ9H2P0 1102 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 ARHGEF38Q9NXL2 777 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 MOSPD1Q9UJG1 213 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 PCDHB2Q9Y5E7 798 aa21.11■□□□□ 0.97
RNF40-203ENST00000493683 ZNF185O15231 689 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 ZSCAN9O15535 394 aaPredicted RBP21.1■□□□□ 0.97
RNF40-203ENST00000493683 IL18RAPO95256 599 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 RMDN2Q96LZ7 410 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 FAM32AQ9Y421 112 aaKnown RBP21.1■□□□□ 0.97
RNF40-203ENST00000493683 CCDC78A2IDD5 438 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 PDGFRAP16234 1089 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 TC2NQ8N9U0 490 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 ERP44Q9BS26 406 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 DDX28Q9NUL7 540 aaKnown RBP21.1■□□□□ 0.97
RNF40-203ENST00000493683 SEPT3Q9UH03 358 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 CCT8L1PA6NM43 557 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 TLR2O60603 784 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 FMR1Q06787 632 aaKnown RBP eCLIP21.1■□□□□ 0.974e-6■■■□□ 16.3
RNF40-203ENST00000493683 PTK7Q13308 1070 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 SLC30A9Q6PML9 568 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 USP38Q8NB14 1042 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 SIK2Q9H0K1 926 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 RAB6BQ9NRW1 208 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 TNPO2O14787 897 aaKnown RBP21.1■□□□□ 0.97
RNF40-203ENST00000493683 MOCS2O96007 188 aaPredicted RBP21.1■□□□□ 0.97
RNF40-203ENST00000493683 KCNA3P22001 575 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 RFC5P40937 340 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 LONRF1Q17RB8 773 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 IL17RAQ96F46 866 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 ATP11BQ9Y2G3 1177 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 OVOS2A0A0G2JMS6 1433 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 OVOS2A0A0J9YW53 1432 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 OVOS2Q6IE36 1432 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 PJA2O43164 708 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 AKAP10O43572 662 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 APRTP07741 180 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 STAT5BP51692 787 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 MRPS15P82914 257 aaKnown RBP21.1■□□□□ 0.97
RNF40-203ENST00000493683 FOXD4Q12950 439 aaPredicted RBP21.1■□□□□ 0.97
RNF40-203ENST00000493683 PLD3Q8IV08 490 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 SP8Q8IXZ3 490 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 CELF1Q92879 486 aaKnown RBP21.1■□□□□ 0.97
RNF40-203ENST00000493683 ERP27Q96DN0 273 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 CLMNQ96JQ2 1002 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 FOPNLQ96NB1 174 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 ZNF556Q9HAH1 456 aa21.1■□□□□ 0.97
RNF40-203ENST00000493683 CYP19A1P11511 503 aaPredicted RBP21.09■□□□□ 0.97
RNF40-203ENST00000493683 DMC1Q14565 340 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 PDK1Q15118 436 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 PTPRN2Q92932 1015 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 CYFIP2Q96F07 1278 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 NRKQ7Z2Y5 1582 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 LCP1P13796 627 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 MAGEA4P43358 317 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 DEFA1P59665 94 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 DEFA3P59666 94 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 ZNF543Q08ER8 600 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 MTFR1Q15390 333 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 WDR72Q3MJ13 1102 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 RBM12Q9NTZ6 932 aaKnown RBP21.09■□□□□ 0.97
RNF40-203ENST00000493683 ABCA8O94911 1581 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 HOXD10P28358 340 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 CARSP49589 748 aaKnown RBP21.09■□□□□ 0.97
RNF40-203ENST00000493683 USP10Q14694 798 aaKnown RBP21.09■□□□□ 0.97
RNF40-203ENST00000493683 RBBP8NLQ8NC74 664 aaPredicted RBP21.09■□□□□ 0.97
RNF40-203ENST00000493683 LPAR1Q92633 364 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 FAM84BQ96KN1 310 aaPredicted RBP21.09■□□□□ 0.97
RNF40-203ENST00000493683 SERPINB12Q96P63 405 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 ITM2BQ9Y287 266 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 TET3O43151 1660 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 SPATA31A3Q5VYP0 1347 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 C5orf58C9J3I9 102 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 ATPAF2Q8N5M1 289 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 MS4A14Q96JA4 679 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 OSBPL8Q9BZF1 889 aa21.09■□□□□ 0.97
RNF40-203ENST00000493683 POLBP06746 335 aa21.08■□□□□ 0.97
RNF40-203ENST00000493683 FXR1P51114 621 aaKnown RBP eCLIP21.08■□□□□ 0.97
RNF40-203ENST00000493683 SNRNP35Q16560 246 aaKnown RBP21.08■□□□□ 0.97
RNF40-203ENST00000493683 STOX1Q6ZVD7 989 aa21.08■□□□□ 0.97
RNF40-203ENST00000493683 COL23A1Q86Y22 540 aaPredicted RBP21.08■□□□□ 0.97
RNF40-203ENST00000493683 APPL2Q8NEU8 664 aa21.08■□□□□ 0.97
RNF40-203ENST00000493683 ATF5Q9Y2D1 282 aaPredicted RBP21.08■□□□□ 0.97
RNF40-203ENST00000493683 FNTAP49354 379 aa21.08■□□□□ 0.97
RNF40-203ENST00000493683 WLSQ5T9L3 541 aa21.08■□□□□ 0.97
RNF40-203ENST00000493683 THEMIS2Q5TEJ8 643 aa21.08■□□□□ 0.97
RNF40-203ENST00000493683 RIC8BQ9NVN3 520 aa21.08■□□□□ 0.97
RNF40-203ENST00000493683 WDR47O94967 919 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 AKR1B1P15121 316 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 RANBP1P43487 201 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 NCOA4Q13772 614 aa21.08■□□□□ 0.96
RNF40-203ENST00000493683 RNF149Q8NC42 400 aa21.08■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms