RNA–Protein interactions for RNA: ENST00000493232.5

BRAT1-206, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,360 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-206ENST00000493232 HDAC4P56524 1084 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 ANKMY2Q8IV38 441 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 ICA1LQ8NDH6 482 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 CALML6Q8TD86 181 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 ARHGEF38Q9NXL2 777 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 EXTL3O43909 919 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 MAP3K10Q02779 954 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 PDK1Q15118 436 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 MEI1Q5TIA1 1274 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 ABTB1Q969K4 478 aaPredicted RBP17.12■□□□□ 0.33
BRAT1-206ENST00000493232 CATSPERBQ9H7T0 1116 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 PAK5Q9P286 719 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 ZDHHC9Q9Y397 364 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 SLC30A1Q9Y6M5 507 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 USP27XA6NNY8 438 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 EFCAB14O75071 495 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 SUPT3HO75486 399 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 CUL3Q13618 768 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 CLMNQ96JQ2 1002 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 PDLIM2Q96JY6 352 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 DACH2Q96NX9 599 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 MCEEQ96PE7 176 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 SLC7A5P2Q9GIP4 190 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 A0A0G2JLW4 131 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 VGLL3A8MV65 326 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 APRTP07741 180 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 CTSHP09668 335 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 RPA1P27694 616 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 FXR2P51116 673 aaKnown RBP eCLIP17.12■□□□□ 0.336e-8■■■■■ 29.6
BRAT1-206ENST00000493232 KRT72Q14CN4 511 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 DDX53Q86TM3 631 aaKnown RBP17.12■□□□□ 0.33
BRAT1-206ENST00000493232 SLC30A5Q8TAD4 765 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 RBM15Q96T37 977 aaKnown RBP eCLIP17.12■□□□□ 0.332e-10■■■■■ 28.6
BRAT1-206ENST00000493232 RSAD1Q9HA92 442 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 CYP4F11Q9HBI6 524 aa17.12■□□□□ 0.33
BRAT1-206ENST00000493232 A0A1W2PQJ5 194 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 CETPP11597 493 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 WASHC5Q12768 1159 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 ANGEL2Q5VTE6 544 aaKnown RBP17.11■□□□□ 0.33
BRAT1-206ENST00000493232 FBXO33Q7Z6M2 555 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 HPS3Q969F9 1004 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 RAB6BQ9NRW1 208 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 MTSS1O43312 755 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 HLA-DRAP01903 254 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 KRT16P08779 473 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 MYBP10242 640 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 INPP5AQ14642 412 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 RASGRP2Q7LDG7 609 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 SPATA21Q7Z572 469 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 TSC22D3Q99576 134 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 NIF3L1Q9GZT8 377 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 PSMC3IPQ9P2W1 217 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-206ENST00000493232 TSR3Q9UJK0 312 aaKnown RBP17.11■□□□□ 0.33
BRAT1-206ENST00000493232 GAS2O43903 313 aaKnown RBP17.11■□□□□ 0.33
BRAT1-206ENST00000493232 NDUFS3O75489 264 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 ASMTLO95671 621 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 PNPLA4P41247 253 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 TMED1Q13445 227 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 GPRC5AQ8NFJ5 357 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 CCDC90BQ9GZT6 254 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 TMEM253P0C7T8 217 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 MED21Q13503 144 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 EFHC1Q5JVL4 640 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 PTPRN2Q92932 1015 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 ATXN7L3BQ96GX2 97 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 NR1H4Q96RI1 486 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-206ENST00000493232 TMEM117Q9H0C3 514 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 KLHL11Q9NVR0 708 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 FAM205CA6NFA0 338 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 ZNF157P51786 506 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-206ENST00000493232 VCPP55072 806 aaKnown RBP17.11■□□□□ 0.33
BRAT1-206ENST00000493232 HIC1Q14526 733 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 GGA3Q9NZ52 723 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 ARL2BPQ9Y2Y0 163 aa17.11■□□□□ 0.33
BRAT1-206ENST00000493232 GTF3C5Q9Y5Q8 519 aaPredicted RBP17.11■□□□□ 0.33
BRAT1-206ENST00000493232 C1orf167Q5SNV9 1468 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 CDC42BPAQ5VT25 1732 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 ARHGAP10A1A4S6 786 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 CYP2C9P11712 490 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 GPRASP2Q96D09 838 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 LRRC1Q9BTT6 524 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 VIPAS39Q9H9C1 493 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 C17orf75Q9HAS0 396 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 TUBE1Q9UJT0 475 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 PTPRUQ92729 1446 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 MYO1CO00159 1063 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 NTSR2O95665 410 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 DPF2Q92785 391 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 XPO7Q9UIA9 1087 aaKnown RBP17.1■□□□□ 0.33
BRAT1-206ENST00000493232 CDV3Q9UKY7 258 aaKnown RBP17.1■□□□□ 0.33
BRAT1-206ENST00000493232 LAMC2Q13753 1193 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 DGKDQ16760 1214 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 ZNF512Q96ME7 567 aaPredicted RBP17.1■□□□□ 0.33
BRAT1-206ENST00000493232 AGAP3Q96P47 875 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 UNC45AQ9H3U1 944 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 JMJD4Q9H9V9 463 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 NIPSNAP3AQ9UFN0 247 aaPredicted RBP17.1■□□□□ 0.33
BRAT1-206ENST00000493232 REREQ9P2R6 1566 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 KRT4P19013 534 aa17.1■□□□□ 0.33
BRAT1-206ENST00000493232 AKT1P31749 480 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms