RNA–Protein interactions for RNA: ENST00000492796.5

CDC42SE1-206, Transcript of CDC42 small effector 1, humanhuman

TSL 2

Gene CDC42SE1, Length 1,174 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-206ENST00000492796 KIF20AO95235 890 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 NFICP08651 508 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 PRR29P0C7W0 189 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 TKTP29401 623 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 MCM4P33991 863 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 FAM160A1Q05DH4 1040 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 STK4Q13043 487 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 KCNB1Q14721 858 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 SURF1Q15526 300 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 KNOP1Q1ED39 458 aaKnown RBP11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 CES5AQ6NT32 575 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 SYCE2Q6PIF2 218 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 PRSS55Q6UWB4 352 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 NELFCDQ8IXH7 590 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 C12orf56Q8IXR9 622 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 KIAA0895Q8NCT3 520 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 SUSD6Q92537 303 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 S1PR5Q9H228 398 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 ADAM7Q9H2U9 754 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 PCIF1Q9H4Z3 704 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 MAN1C1Q9NR34 630 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 HSPBP1Q9NZL4 362 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 USP15Q9Y4E8 981 aaPredicted RBP11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 BACE2Q9Y5Z0 518 aa11.55□□□□□ -0.56
CDC42SE1-206ENST00000492796 TSC2P49815 1807 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 GOLGA8IPA6NC78 632 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 ZNF233A6NK53 670 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 SPDYE4A6NLX3 237 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 GOLGA8JA6NMD2 632 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 H7C4K7 107 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 I3L4J1 428 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 M0QZQ0 153 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 IGFBP6P24592 240 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 AARSP49588 968 aaKnown RBP eCLIP11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 SNW1Q13573 536 aaKnown RBP11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 CBX2Q14781 532 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 VARS2Q5ST30 1063 aaKnown RBP11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 C9orf57Q5W0N0 161 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 ADHFE1Q8IWW8 467 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 EFCAB13Q8IY85 973 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 APPL2Q8NEU8 664 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 ENGASEQ8NFI3 743 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 CMASQ8NFW8 434 aaPredicted RBP11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 TMEM174Q8WUU8 243 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 RIPOR3Q96MK2 946 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 TIGD1Q96MW7 591 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 NECTIN4Q96NY8 510 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 CLSTN3Q9BQT9 956 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 PLEKHA4Q9H4M7 779 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 HOOK1Q9UJC3 728 aaKnown RBP11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 PCDHB8Q9UN66 801 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 DENND4AQ7Z401 1863 aa11.54□□□□□ -0.56
CDC42SE1-206ENST00000492796 ANO9A1A5B4 782 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 ARHGEF37A1IGU5 675 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 TNFRSF10AO00220 468 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 PIRO00625 290 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 PDXKO00764 312 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 TGM5O43548 720 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 PAPLNO95428 1278 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 RPL17P18621 184 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 MTHFRP42898 656 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 GUCY2FP51841 1108 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 ZP2Q05996 745 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 SNRNP35Q16560 246 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 RARS2Q5T160 578 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 ZNF280DQ6N043 979 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 LILRA6Q6PI73 481 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 CYP26C1Q6V0L0 522 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 C15orf39Q6ZRI6 1047 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 PALB2Q86YC2 1186 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 ELOA2Q8IYF1 753 aaPredicted RBP11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 XXYLT1Q8NBI6 393 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 ZSWIM2Q8NEG5 633 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 NOC3LQ8WTT2 800 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 CACTINQ8WUQ7 758 aaKnown RBP11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 ZNF560Q96MR9 790 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 PHF7Q9BWX1 381 aaPredicted RBP11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 OXCT2Q9BYC2 517 aaPredicted RBP11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 RHOBTB2Q9BYZ6 727 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 RMND1Q9NWS8 449 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 DPP3Q9NY33 737 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 FBXW11Q9UKB1 542 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 CDY1Q9Y6F8 540 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 VCANP13611 3396 aa11.53□□□□□ -0.56
CDC42SE1-206ENST00000492796 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 KINO60870 393 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 SMC2O95347 1197 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 TMEM191BP0C7N4 346 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 ODC1P11926 461 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 TYMPP19971 482 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 OR1D2P34982 312 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 PNPLA4P41247 253 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 TAF6P49848 677 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 CYP2J2P51589 502 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 LILRA4P59901 499 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 TFAMQ00059 246 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 RAB33AQ14088 237 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 MRPL58Q14197 206 aaKnown RBP11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 ATAT1Q5SQI0 421 aa11.52□□□□□ -0.57
CDC42SE1-206ENST00000492796 SLC8B1Q6J4K2 584 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms