RNA–Protein interactions for RNA: ENST00000492386.5

SEMA4D-220, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,396 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-220ENST00000492386 STYXL1Q9Y6J8 313 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 SIP14410 1827 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 THAP12O43422 761 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 DKC1O60832 514 aaKnown RBP eCLIP17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 FDX1P10109 184 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 TNNI1P19237 187 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 PIK3CAP42336 1068 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 LIG4P49917 911 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 NOMO3P69849 1222 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 MAMLD1Q13495 774 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 MPP2Q14168 576 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 CCNG2Q16589 344 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 RHOT1Q8IXI2 618 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 KATNAL2Q8IYT4 538 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 FAM118BQ9BPY3 351 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 HAPLN2Q9GZV7 340 aa17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 APOBEC3GQ9HC16 384 aaKnown RBP17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 JPH1Q9HDC5 661 aaPredicted RBP17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 TPX2Q9ULW0 747 aaKnown RBP17.15■□□□□ 0.34
SEMA4D-220ENST00000492386 TCP11X1B4DZS4 312 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 MGRN1O60291 552 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 CETPP11597 493 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 ACOT2P49753 483 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 SP4Q02446 784 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 LIN9Q5TKA1 542 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 CRELD2Q6UXH1 353 aaPredicted RBP17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 PASD1Q8IV76 773 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 ABRAQ8N0Z2 381 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 CYP4X1Q8N118 509 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 DYDC1Q8WWB3 177 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 FNBP1Q96RU3 617 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 ABCF3Q9NUQ8 709 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 FGFR1OP2Q9NVK5 253 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 H0YCG3 227 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 CUL2Q13617 745 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 ABHD15Q6UXT9 468 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 TRIM72Q6ZMU5 477 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 REPS2Q8NFH8 660 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 OSBPL8Q9BZF1 889 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 YY1AP1Q9H869 796 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 GINM1Q9NU53 330 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 ADAM22Q9P0K1 906 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 LGALS13Q9UHV8 139 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 AGO2Q9UKV8 859 aaKnown RBP17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 CD2APQ9Y5K6 639 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 NFASCO94856 1347 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 ZNF541Q9H0D2 1346 aa17.14■□□□□ 0.33
SEMA4D-220ENST00000492386 EGFRP00533 1210 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 KCNA3P22001 575 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 SSTR3P32745 418 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 ACTR2P61160 394 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 ELF3P78545 371 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 PLEKHA7Q6IQ23 1121 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 PHF13Q86YI8 300 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 RELL1Q8IUW5 271 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 FAM212AQ96EL1 285 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 VCPIP1Q96JH7 1222 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 VPS33BQ9H267 617 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 SLC9A2Q9UBY0 812 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 USP15Q9Y4E8 981 aaPredicted RBP17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 CD58P19256 250 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 KLRC2P26717 231 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 TMEM270Q6UE05 265 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 CCDC91Q7Z6B0 441 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 CCDC89Q8N998 374 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 ANKRD42Q8N9B4 389 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 EXD1Q8NHP7 514 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 NSUN6Q8TEA1 469 aaKnown RBP17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 CKAP2Q8WWK9 683 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 MRPL47Q9HD33 250 aaKnown RBP17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 MLXIPLQ9NP71 852 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 KCNK9Q9NPC2 374 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 PCDHB4Q9Y5E5 795 aa17.13■□□□□ 0.33
SEMA4D-220ENST00000492386 GH1P01241 217 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 BRAFP15056 766 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 GNA15P30679 374 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 ABCD1P33897 745 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 EMC2Q15006 297 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 MTERF2Q49AM1 385 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 FAM133BQ5BKY9 247 aaKnown RBP17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 ZBTB41Q5SVQ8 909 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 IZUMO3Q5VZ72 239 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 ZNF365Q70YC5 407 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 PRUNE1Q86TP1 453 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 BBOF1Q8ND07 529 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 MAGEC3Q8TD91 643 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 EURLQ9NYK6 297 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 AGAP1Q9UPQ3 857 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 CNTN6Q9UQ52 1028 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 PHIPQ8WWQ0 1821 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 DOCK1Q14185 1865 aa17.12■□□□□ 0.33
SEMA4D-220ENST00000492386 GJB6O95452 261 aa17.11■□□□□ 0.33
SEMA4D-220ENST00000492386 GSCP56915 257 aaPredicted RBP17.11■□□□□ 0.33
SEMA4D-220ENST00000492386 SNRNP48Q6IEG0 339 aaKnown RBP17.11■□□□□ 0.33
SEMA4D-220ENST00000492386 HIBCHQ6NVY1 386 aaPredicted RBP17.11■□□□□ 0.33
SEMA4D-220ENST00000492386 ZBTB45Q96K62 511 aaPredicted RBP17.11■□□□□ 0.33
SEMA4D-220ENST00000492386 NAALADL1Q9UQQ1 740 aa17.11■□□□□ 0.33
SEMA4D-220ENST00000492386 USTQ9Y2C2 406 aa17.11■□□□□ 0.33
SEMA4D-220ENST00000492386 TLR3O15455 904 aaKnown RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms