RNA–Protein interactions for RNA: ENST00000491916.1

SS18L1-204, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18L1, Length 456 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-204ENST00000491916 M0QZQ0 153 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 ADAM12O43184 909 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 TBC1D4O60343 1298 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 KINO60870 393 aaKnown RBP16.45■□□□□ 0.22
SS18L1-204ENST00000491916 URODP06132 367 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 EPCAMP16422 314 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 RPL17P18621 184 aaKnown RBP16.45■□□□□ 0.22
SS18L1-204ENST00000491916 PRCPP42785 496 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 CLCN4P51793 760 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 MRPS5P82675 430 aaKnown RBP16.45■□□□□ 0.22
SS18L1-204ENST00000491916 CYP24A1Q07973 514 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 ELAVL2Q12926 359 aaKnown RBP16.45■□□□□ 0.22
SS18L1-204ENST00000491916 SNRNP35Q16560 246 aaKnown RBP16.45■□□□□ 0.22
SS18L1-204ENST00000491916 NFIL3Q16649 462 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 LILRA6Q6PI73 481 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 SYCE2Q6PIF2 218 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.45■□□□□ 0.22
SS18L1-204ENST00000491916 HS2ST1Q7LGA3 356 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 NT5DC4Q86YG4 428 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 C1orf127Q8N9H9 656 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 XXYLT1Q8NBI6 393 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 RDH13Q8NBN7 331 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 BEST2Q8NFU1 509 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 MFSD14AQ96MC6 490 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 S1PR5Q9H228 398 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 KIAA1586Q9HCI6 787 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 DPP3Q9NY33 737 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 SIX4Q9UIU6 781 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 MAN1B1Q9UKM7 699 aa16.45■□□□□ 0.22
SS18L1-204ENST00000491916 CASP4P49662 377 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 LILRA4P59901 499 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 BMS1Q14692 1282 aaKnown RBP16.44■□□□□ 0.22
SS18L1-204ENST00000491916 PSMD6Q15008 389 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 ZNF658Q5TYW1 1059 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-204ENST00000491916 LMBRD2Q68DH5 695 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-204ENST00000491916 LLGL2Q6P1M3 1020 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 CEP57Q86XR8 500 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 OR5B17Q8NGF7 314 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 GOLGA5Q8TBA6 731 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 SMARCE1Q969G3 411 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 CCDC47Q96A33 483 aaKnown RBP16.44■□□□□ 0.22
SS18L1-204ENST00000491916 CCDC34Q96HJ3 373 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 SSX2IPQ9Y2D8 614 aa16.44■□□□□ 0.22
SS18L1-204ENST00000491916 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.44■□□□□ 0.22
SS18L1-204ENST00000491916 TCF20Q9UGU0 1960 aaKnown RBP16.44■□□□□ 0.22
SS18L1-204ENST00000491916 GRXCR2A6NFK2 248 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 XPOTO43592 962 aaKnown RBP16.43■□□□□ 0.22
SS18L1-204ENST00000491916 SMC2O95347 1197 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 NR3C1P04150 777 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 CD44P16070 742 aaKnown RBP16.43■□□□□ 0.22
SS18L1-204ENST00000491916 PMS1P54277 932 aaKnown RBP16.43■□□□□ 0.22
SS18L1-204ENST00000491916 MCCD1P59942 119 aaPredicted RBP16.43■□□□□ 0.22
SS18L1-204ENST00000491916 MORC3Q14149 939 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 MYBPC2Q14324 1141 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 CENPPQ6IPU0 288 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 ANKRD54Q6NXT1 300 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 SMRP1Q8NCR6 262 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 ZNF516Q92618 1163 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 POP1Q99575 1024 aaKnown RBP16.43■□□□□ 0.22
SS18L1-204ENST00000491916 EMILIN2Q9BXX0 1053 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 INTS13Q9NVM9 706 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 RMND1Q9NWS8 449 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 MTRRQ9UBK8 725 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 MTCL1Q9Y4B5 1905 aaKnown RBP16.43■□□□□ 0.22
SS18L1-204ENST00000491916 NCOR1O75376 2440 aa16.43■□□□□ 0.22
SS18L1-204ENST00000491916 FSD2A1L4K1 749 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 SYN3O14994 580 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 TRAPPC3O43617 180 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 KLRC2P26717 231 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 CA8P35219 290 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 NDUFV1P49821 464 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 CLDN10P78369 228 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 TFAMQ00059 246 aaKnown RBP16.42■□□□□ 0.22
SS18L1-204ENST00000491916 CLUL1Q15846 466 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 PSMD5Q16401 504 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 VARS2Q5ST30 1063 aaKnown RBP16.42■□□□□ 0.22
SS18L1-204ENST00000491916 C1orf220Q5T0J3 134 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 ISM2Q6H9L7 571 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 KIAA1841Q6NSI8 718 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 EP400NLQ6ZTU2 488 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 ZC3H3Q8IXZ2 948 aaKnown RBP16.42■□□□□ 0.22
SS18L1-204ENST00000491916 ADSSL1Q8N142 457 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 NOC3LQ8WTT2 800 aaKnown RBP16.42■□□□□ 0.22
SS18L1-204ENST00000491916 MTMR12Q9C0I1 747 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP16.42■□□□□ 0.22
SS18L1-204ENST00000491916 PCDHB8Q9UN66 801 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 BACE2Q9Y5Z0 518 aa16.42■□□□□ 0.22
SS18L1-204ENST00000491916 PPP1R3GB7ZBB8 358 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 MBTPS2O43462 519 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 EXOC3O60645 756 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 PAPLNO95428 1278 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 C1RP00736 705 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 MCM4P33991 863 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 CAMK4Q16566 473 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 PPFIBP1Q86W92 1011 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 GPT2Q8TD30 523 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 PARD3BQ8TEW8 1205 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 CD207Q9UJ71 328 aa16.41■□□□□ 0.22
SS18L1-204ENST00000491916 HOOK1Q9UJC3 728 aaKnown RBP16.41■□□□□ 0.22
SS18L1-204ENST00000491916 NUB1Q9Y5A7 615 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms