RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 SMC6Q96SB8 1091 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ZWILCHQ9H900 591 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 GDF3Q9NR23 364 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 COL20A1Q9P218 1284 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 MAP2K7O14733 419 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 PMM2O15305 246 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ATP2C2O75185 946 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 MAFO75444 373 aaPredicted RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CD4P01730 458 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 KRT14P02533 472 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 COILP38432 576 aaPredicted RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 JAM2P57087 298 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CNTN2Q02246 1040 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 C1QBPQ07021 282 aaKnown RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 SLC47A2Q86VL8 602 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CNPY4Q8N129 248 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 RNF25Q96BH1 459 aaPredicted RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 POP1Q99575 1024 aaKnown RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 HEMGNQ9BXL5 484 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 LRRC4Q9HBW1 653 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 HAUS2Q9NVX0 235 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 PHF20L1A8MW92 1017 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 SMAPO00193 183 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 NFKBIEO00221 500 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 MCF2P10911 925 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CCT5P48643 541 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ARL4CP56559 192 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 MAPK7Q13164 816 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 UGCGQ16739 394 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CELF3Q5SZQ8 465 aaKnown RBP7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ABRAQ8N0Z2 381 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 PDIK1LQ8N165 341 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CCDC63Q8NA47 563 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 CYP3A43Q9HB55 503 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 AGAP1Q9UPQ3 857 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 NUB1Q9Y5A7 615 aa7.79□□□□□ -1.16
NPHP3-208ENST00000490993 ADM5C9JUS6 153 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 CCNE2O96020 404 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 PGK2P07205 417 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 KCNA2P16389 499 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 SDC4P31431 198 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 PTENP60484 403 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 BYSLQ13895 437 aaKnown RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ARHGEF6Q15052 776 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 TRIP13Q15645 432 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 C6orf163Q5TEZ5 329 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 PHLDB3Q6NSJ2 640 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 PLEKHH3Q7Z736 793 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 C10orf67Q8IYJ2 551 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 SIX6OS1Q8N1H7 587 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ANKRD42Q8N9B4 389 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 UHMK1Q8TAS1 419 aaKnown RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 AENQ8WTP8 325 aaKnown RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 PPCSQ9HAB8 311 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 OSGEPQ9NPF4 335 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ZNF112Q9UJU3 913 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ZNF541Q9H0D2 1346 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 TMEM150BA6NC51 233 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ACKR2O00590 384 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 GYS2P54840 703 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 LBX2Q6XYB7 198 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 NT5DC4Q86YG4 428 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 FBXO16Q8IX29 292 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 LRRC15Q8TF66 581 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 C1orf54Q8WWF1 131 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 CRYGNQ8WXF5 182 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 EHD2Q9NZN4 543 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 TLR2O60603 784 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 AGTP01019 485 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ADRB2P07550 413 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ZFXP17010 805 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 GLRA2P23416 452 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 AARSP49588 968 aaKnown RBP eCLIP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 DYNLT1P63172 113 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 DLG4P78352 724 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 MAP3K10Q02779 954 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ZBTB16Q05516 673 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 LY6KQ17RY6 165 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 SH3D19Q5HYK7 790 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 SPDYCQ5MJ68 293 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 MFSD14CQ5VZR4 134 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 GPAT2Q6NUI2 795 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 MCOLN2Q8IZK6 566 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 CCDC197Q8NCU1 140 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 REPS2Q8NFH8 660 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 LNX1Q8TBB1 728 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 SHC3Q92529 594 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 HSPH1Q92598 858 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ATP2A3Q93084 1043 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 TNIP3Q96KP6 325 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 TRIM51Q9BSJ1 452 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ROPN1BQ9BZX4 212 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 GOLPH3Q9H4A6 298 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ROPN1Q9HAT0 212 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 KLHL14Q9P2G3 628 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 ZNF536O15090 1300 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 A0A087WUV0 522 aaPredicted RBP7.78□□□□□ -1.16
NPHP3-208ENST00000490993 EXOC1LA0A1B0GW35 172 aa7.78□□□□□ -1.16
NPHP3-208ENST00000490993 PROSCO94903 275 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms