RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 AOX1Q06278 1338 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 DYNC1LI2O43237 492 aaPredicted RBP3.41□□□□□ -1.86
UBXN4-208ENST00000490163 EFEMP2O95967 443 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 ANXA1P04083 346 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 AMY1AP04745 511 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 SRGAP2BP0DMP2 458 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 SCG2P13521 617 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 PREPP48147 710 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 ALDH3A2P51648 485 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 ITGA8P53708 1063 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 ACTR2P61160 394 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 IL10RAQ13651 578 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 DUOXA2Q1HG44 320 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 HLA-DQA1Q5Y7H0 255 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 TRIM68Q6AZZ1 485 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 SEM1Q6ZVN7 128 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 CLEC10AQ8IUN9 316 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 PAF1Q8N7H5 531 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 OR6Y1Q8NGX8 325 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 EDARADDQ8WWZ3 215 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 FERMT2Q96AC1 680 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 MAP6Q96JE9 813 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 MIPEPQ99797 713 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 NCAPGQ9BPX3 1015 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 WSB2Q9NYS7 404 aaPredicted RBP3.41□□□□□ -1.86
UBXN4-208ENST00000490163 TRPS1Q9UHF7 1281 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 DSEQ9UL01 958 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 MINPP1Q9UNW1 487 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 AFG3L2Q9Y4W6 797 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 PCDHGB2Q9Y5G2 931 aa3.41□□□□□ -1.86
UBXN4-208ENST00000490163 C17orf113A0A1B0GUU1 675 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 UBA6A0AVT1 1052 aaPredicted RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 LEFTY1O75610 366 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 MT-ND5P03915 603 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 SRGAP2CP0DJJ0 459 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 MALP21145 153 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 EPHA8P29322 1005 aaPredicted RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 ARL1P40616 181 aaPredicted RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 BCL6P41182 706 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 PCBP3P57721 371 aaKnown RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 AIMP2Q13155 320 aaKnown RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 DGKDQ16760 1214 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 RIPOR1Q6ZS17 1223 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 H1FNTQ75WM6 255 aaPredicted RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 DAAM2Q86T65 1068 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 SLC44A2Q8IWA5 706 aaPredicted RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 FAM217AQ8IXS0 508 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 CNPY4Q8N129 248 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 ZNF527Q8NB42 609 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 SNX33Q8WV41 574 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 ATP2A3Q93084 1043 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 TSPAN17Q96FV3 270 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 ZMAT2Q96NC0 199 aaKnown RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 ADPGKQ9BRR6 497 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 CD244Q9BZW8 370 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 KATNBL1Q9H079 304 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 CHST8Q9H2A9 424 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 ERVK-5Q9HDB9 667 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 SIRT3Q9NTG7 399 aaPredicted RBP3.4□□□□□ -1.86
UBXN4-208ENST00000490163 CDC42BPBQ9Y5S2 1711 aa3.4□□□□□ -1.86
UBXN4-208ENST00000490163 GTPBP10A4D1E9 387 aaKnown RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 PRR33A8MZF0 331 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 F2RL2O00254 374 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 LTA4HP09960 611 aaKnown RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 CRHR1P34998 444 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 DNM2P50570 870 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 DRG2P55039 364 aaKnown RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 MLLT6P55198 1093 aaPredicted RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 NAP1L1P55209 391 aaKnown RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 ERVFRD-1P60508 538 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 NUTM2GQ5VZR2 741 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 UNQ6494/PRO21346Q6UXR6 183 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 RTL10Q7L3V2 364 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 BEND5Q7L4P6 421 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 MAATS1Q7Z4T9 603 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 FTSJ3Q8IY81 847 aaKnown RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 RSPH1Q8WYR4 309 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 KTI12Q96EK9 354 aaPredicted RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 FIZ1Q96SL8 496 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 MESP1Q9BRJ9 268 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 CNPPD1Q9BV87 410 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 SLC26A6Q9BXS9 759 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 TRMT1Q9NXH9 659 aaKnown RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 EXTL2Q9UBQ6 330 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 FBXL21Q9UKT6 434 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 SCAF8Q9UPN6 1271 aaKnown RBP3.4□□□□□ -1.87
UBXN4-208ENST00000490163 ADGBQ8N7X0 1667 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 MAGI3Q5TCQ9 1506 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 SYNDIG1LA6NDD5 238 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 NEURL1BA8MQ27 555 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 SGSM2O43147 1006 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 PHF2O75151 1096 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 MATN4O95460 622 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 CLEC3BP05452 202 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 QDPRP09417 244 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 NLRP12P59046 1061 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 BPIFB3P59826 476 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 ST5P78524 1137 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 PLEKHS1Q5SXH7 462 aa3.4□□□□□ -1.87
UBXN4-208ENST00000490163 NOL9Q5SY16 702 aaKnown RBP3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms