RNA–Protein interactions for RNA: ENST00000490062.1

ERCC3-207, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 4

Gene ERCC3, Length 576 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-207ENST00000490062 SUSD3Q96L08 255 aa18.85■□□□□ 0.61
ERCC3-207ENST00000490062 GPR62Q9BZJ7 368 aa18.85■□□□□ 0.61
ERCC3-207ENST00000490062 MTMR12Q9C0I1 747 aa18.85■□□□□ 0.61
ERCC3-207ENST00000490062 METTL14Q9HCE5 456 aaKnown RBP18.85■□□□□ 0.61
ERCC3-207ENST00000490062 SIX4Q9UIU6 781 aa18.85■□□□□ 0.61
ERCC3-207ENST00000490062 SSX2IPQ9Y2D8 614 aa18.85■□□□□ 0.61
ERCC3-207ENST00000490062 PRRC2BQ5JSZ5 2229 aaKnown RBP18.85■□□□□ 0.61
ERCC3-207ENST00000490062 M0QZQ0 153 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 SYN3O14994 580 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 FGFR1OPO95684 399 aaKnown RBP18.84■□□□□ 0.61
ERCC3-207ENST00000490062 STAU1O95793 577 aaKnown RBP18.84■□□□□ 0.61
ERCC3-207ENST00000490062 GNA14O95837 355 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 TNNC2P02585 160 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 FGFR3P22607 806 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 GTF2H1P32780 548 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 VAMP7P51809 220 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 GUCY2FP51841 1108 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 ERVFC1P60507 584 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 BMS1Q14692 1282 aaKnown RBP18.84■□□□□ 0.61
ERCC3-207ENST00000490062 NFKBIBQ15653 356 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 USP41Q3LFD5 358 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.84■□□□□ 0.61
ERCC3-207ENST00000490062 C15orf39Q6ZRI6 1047 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 TRAPPC11Q7Z392 1133 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 FRMD5Q7Z6J6 570 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 VPS52Q8N1B4 723 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 CSGALNACT2Q8N6G5 542 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 NOC3LQ8WTT2 800 aaKnown RBP18.84■□□□□ 0.61
ERCC3-207ENST00000490062 MYLIPQ8WY64 445 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 ZNF516Q92618 1163 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 CCDC127Q96BQ5 260 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 SCN1AP35498 2009 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 MYO7AQ13402 2215 aa18.84■□□□□ 0.61
ERCC3-207ENST00000490062 VWA8A3KMH1 1905 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 C1RP00736 705 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 C4BPAP04003 597 aaKnown RBP18.83■□□□□ 0.6
ERCC3-207ENST00000490062 DLATP10515 647 aaKnown RBP18.83■□□□□ 0.6
ERCC3-207ENST00000490062 KRT13P13646 458 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 TNNI1P19237 187 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 IGFBP6P24592 240 aaPredicted RBP18.83■□□□□ 0.6
ERCC3-207ENST00000490062 LILRA4P59901 499 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 RBP5P82980 135 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 STX1AQ16623 288 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 ZACNQ401N2 412 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 KIAA0319Q5VV43 1072 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 MRPL43Q8N983 215 aaKnown RBP18.83■□□□□ 0.6
ERCC3-207ENST00000490062 RABGGTAQ92696 567 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 ZNF560Q96MR9 790 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 FUCA2Q9BTY2 467 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 VRTNQ9H8Y1 702 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 RXFP1Q9HBX9 757 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 STXBP5LQ9Y2K9 1186 aa18.83■□□□□ 0.6
ERCC3-207ENST00000490062 FSD2A1L4K1 749 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 PPEF2O14830 753 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 PMM2O15305 246 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 FOSL2P15408 326 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 IRS1P35568 1242 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 GLUD2P49448 558 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 TAF6P49848 677 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 STX17P56962 302 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 DLG4P78352 724 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 SMC1AQ14683 1233 aaKnown RBP18.82■□□□□ 0.6
ERCC3-207ENST00000490062 COL19A1Q14993 1142 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 PTPN14Q15678 1187 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 PDXDC1Q6P996 788 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 ENOX1Q8TC92 643 aaKnown RBP18.82■□□□□ 0.6
ERCC3-207ENST00000490062 PIK3R5Q8WYR1 880 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 POP1Q99575 1024 aaKnown RBP18.82■□□□□ 0.6
ERCC3-207ENST00000490062 TCF25Q9BQ70 676 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 NSUN3Q9H649 340 aaKnown RBP18.82■□□□□ 0.6
ERCC3-207ENST00000490062 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.82■□□□□ 0.6
ERCC3-207ENST00000490062 GDAP2Q9NXN4 497 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 FNIP2Q9P278 1114 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 ARMCX3Q9UH62 379 aaPredicted RBP18.82■□□□□ 0.6
ERCC3-207ENST00000490062 NUB1Q9Y5A7 615 aa18.82■□□□□ 0.6
ERCC3-207ENST00000490062 ARHGEF37A1IGU5 675 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 C2orf71A6NGG8 1288 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 STX10O60499 249 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 ITGB3P05106 788 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 CYP11A1P05108 521 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 URODP06132 367 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 TYMPP19971 482 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 POLR2BP30876 1174 aaKnown RBP18.81■□□□□ 0.6
ERCC3-207ENST00000490062 TYRO3Q06418 890 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 MRPL58Q14197 206 aaKnown RBP18.81■□□□□ 0.6
ERCC3-207ENST00000490062 LMBRD2Q68DH5 695 aaPredicted RBP18.81■□□□□ 0.6
ERCC3-207ENST00000490062 SV2AQ7L0J3 742 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 TAS1R1Q7RTX1 841 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 TMC7Q7Z402 723 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 SPATA18Q8TC71 538 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 PPP2R3CQ969Q6 453 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 EEF2KMTQ96G04 330 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 CDCA3Q99618 268 aaPredicted RBP18.81■□□□□ 0.6
ERCC3-207ENST00000490062 TTPALQ9BTX7 342 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 SRRTQ9BXP5 876 aaKnown RBP18.81■□□□□ 0.6
ERCC3-207ENST00000490062 MRPL17Q9NRX2 175 aaKnown RBP18.81■□□□□ 0.6
ERCC3-207ENST00000490062 PCDHB8Q9UN66 801 aa18.81■□□□□ 0.6
ERCC3-207ENST00000490062 SPTLC1O15269 473 aa18.8■□□□□ 0.6
ERCC3-207ENST00000490062 ATICP31939 592 aa18.8■□□□□ 0.6
ERCC3-207ENST00000490062 BRCC3P46736 316 aa18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms