RNA–Protein interactions for RNA: ENST00000490056.5

SFXN5-220, Transcript of sideroflexin 5, humanhuman

TSL 1 (best)

Gene SFXN5, Length 906 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN5-220ENST00000490056 POLR2BP30876 1174 aaKnown RBP18.07■□□□□ 0.48
SFXN5-220ENST00000490056 GCLMP48507 274 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 MCCD1P59942 119 aaPredicted RBP18.07■□□□□ 0.48
SFXN5-220ENST00000490056 KRT17Q04695 432 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 DCAF17Q5H9S7 520 aaPredicted RBP18.07■□□□□ 0.48
SFXN5-220ENST00000490056 TCERG1LQ5VWI1 586 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 TDRD10Q5VZ19 366 aaKnown RBP18.07■□□□□ 0.48
SFXN5-220ENST00000490056 GPR153Q6NV75 609 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 FUT10Q6P4F1 479 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 FRMD5Q7Z6J6 570 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 DEFB123Q8N688 67 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 CNOT6LQ96LI5 555 aaKnown RBP18.07■□□□□ 0.48
SFXN5-220ENST00000490056 METTL14Q9HCE5 456 aaKnown RBP18.07■□□□□ 0.48
SFXN5-220ENST00000490056 ITGA11Q9UKX5 1188 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 NFE2L3Q9Y4A8 694 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 CHD7Q9P2D1 2997 aa18.07■□□□□ 0.48
SFXN5-220ENST00000490056 COL4A4P53420 1690 aaPredicted RBP18.06■□□□□ 0.48
SFXN5-220ENST00000490056 TMEM189-UBE2V1I3L0A0 370 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 IKBKBO14920 756 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 SPTLC1O15269 473 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 PHACTR2O75167 634 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 CST3P01034 146 aaPredicted RBP18.06■□□□□ 0.48
SFXN5-220ENST00000490056 C4BPAP04003 597 aaKnown RBP18.06■□□□□ 0.48
SFXN5-220ENST00000490056 ERVFC1P60507 584 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 BIRC3Q13489 604 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 CAMK1Q14012 370 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 SV2AQ7L0J3 742 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 DDX53Q86TM3 631 aaKnown RBP18.06■□□□□ 0.48
SFXN5-220ENST00000490056 AOPEPQ8N6M6 819 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 B3GALT6Q96L58 329 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 THAP9Q9H5L6 903 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 NUB1Q9Y5A7 615 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 PCDHGC5Q9Y5F6 944 aa18.06■□□□□ 0.48
SFXN5-220ENST00000490056 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.06■□□□□ 0.48
SFXN5-220ENST00000490056 VNN1O95497 513 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 GNA14O95837 355 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 EFEMP2O95967 443 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 ZNF165P49910 485 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 RBP5P82980 135 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 MYL5Q02045 173 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 ENPEPQ07075 957 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 TIGD5Q53EQ6 642 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 USP37Q86T82 979 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 TRIM59Q8IWR1 403 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 VPS52Q8N1B4 723 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 SLC35C1Q96A29 364 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 ELMO3Q96BJ8 720 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 NAT10Q9H0A0 1025 aaKnown RBP18.05■□□□□ 0.48
SFXN5-220ENST00000490056 FANCLQ9NW38 375 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 PUF60Q9UHX1 559 aaKnown RBP18.05■□□□□ 0.48
SFXN5-220ENST00000490056 LZTS1Q9Y250 596 aa18.05■□□□□ 0.48
SFXN5-220ENST00000490056 MYO7AQ13402 2215 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 SF3B1O75533 1304 aaKnown RBP eCLIP18.04■□□□□ 0.485e-6■■■■■ 122.4
SFXN5-220ENST00000490056 IRS1P35568 1242 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 AP3M2P53677 418 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 MARSP56192 900 aaKnown RBP18.04■□□□□ 0.48
SFXN5-220ENST00000490056 LILRA4P59901 499 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 MYL6P60660 151 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 ADGRE1Q14246 886 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 NCAPHQ15003 741 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 ZACNQ401N2 412 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 FAM171A1Q5VUB5 890 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 C15orf39Q6ZRI6 1047 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 RNF168Q8IYW5 571 aaPredicted RBP18.04■□□□□ 0.48
SFXN5-220ENST00000490056 AUTS2Q8WXX7 1259 aa18.04■□□□□ 0.48
SFXN5-220ENST00000490056 SOD2P04179 222 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 MTIF2P46199 727 aaKnown RBP18.03■□□□□ 0.48
SFXN5-220ENST00000490056 TAF6P49848 677 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 UBE3AQ05086 875 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 TRPC3Q13507 836 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 CBWD6Q4V339 395 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 CBWD3Q5JTY5 395 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 CBWD5Q5RIA9 395 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 TMC7Q7Z402 723 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 CEP57Q86XR8 500 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 DHX40Q8IX18 779 aaKnown RBP18.03■□□□□ 0.48
SFXN5-220ENST00000490056 MICAL1Q8TDZ2 1067 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 MYLIPQ8WY64 445 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 SUSD3Q96L08 255 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 CDX2Q99626 313 aaPredicted RBP18.03■□□□□ 0.48
SFXN5-220ENST00000490056 BPIFA3Q9BQP9 254 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 HERC2P3Q9BVR0 1158 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 ZBP1Q9H171 429 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 TMEM8AQ9HCN3 771 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.03■□□□□ 0.482e-20■■■■■ 307.7
SFXN5-220ENST00000490056 TLR9Q9NR96 1032 aa18.03■□□□□ 0.48
SFXN5-220ENST00000490056 R3HCC1Q9Y3T6 440 aaKnown RBP18.03■□□□□ 0.48
SFXN5-220ENST00000490056 KCNJ18B7U540 433 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 C2CD2LO14523 706 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 TRAPPC3O43617 180 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 STX10O60499 249 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 LRRN2O75325 713 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 HLA-DRAP01903 254 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 IGFBP4P22692 258 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 TKTP29401 623 aaKnown RBP18.02■□□□□ 0.48
SFXN5-220ENST00000490056 GTF2H1P32780 548 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 CA8P35219 290 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 AARSP49588 968 aaKnown RBP eCLIP18.02■□□□□ 0.48
SFXN5-220ENST00000490056 KCNH2Q12809 1159 aa18.02■□□□□ 0.48
SFXN5-220ENST00000490056 NCOA4Q13772 614 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms