RNA–Protein interactions for RNA: ENST00000489861.2

COL9A1-209, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 3

Gene COL9A1, Length 243 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-209ENST00000489861 SEC24AO95486 1093 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 APBB3O95704 486 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 LRG1P02750 347 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 AKAP5P24588 427 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 SPIRE1Q08AE8 756 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 TEAD2Q15562 447 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 NAIF1Q69YI7 327 aaPredicted RBP8.11□□□□□ -1.11
COL9A1-209ENST00000489861 ARMCX6Q7L4S7 300 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 NIPA1Q7RTP0 329 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 TMPRSS7Q7RTY8 843 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 SMAP1Q8IYB5 467 aaPredicted RBP8.11□□□□□ -1.11
COL9A1-209ENST00000489861 CMTR1Q8N1G2 835 aaKnown RBP8.11□□□□□ -1.11
COL9A1-209ENST00000489861 HDDC3Q8N4P3 179 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 SRBD1Q8N5C6 995 aaKnown RBP8.11□□□□□ -1.11
COL9A1-209ENST00000489861 ZNF579Q8NAF0 562 aaKnown RBP8.11□□□□□ -1.11
COL9A1-209ENST00000489861 SHKBP1Q8TBC3 707 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 GTPBP2Q9BX10 602 aaKnown RBP8.11□□□□□ -1.11
COL9A1-209ENST00000489861 GLT8D2Q9H1C3 349 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 MYLKQ15746 1914 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 DENND4CQ5VZ89 1909 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 POLQO75417 2590 aa8.11□□□□□ -1.11
COL9A1-209ENST00000489861 CAPN8A6NHC0 703 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 OTOL1A6NHN0 477 aaPredicted RBP8.1□□□□□ -1.11
COL9A1-209ENST00000489861 CASTOR2A6NHX0 329 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 B8ZZF3 427 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 hCG_1984214I3L0E3 225 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 PLEKHA8P1O95397 391 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 CFIP05156 583 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 MYL4P12829 197 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 FGFR3P22607 806 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 MCM5P33992 734 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 GRIK3Q13003 919 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 HNRNPDQ14103 355 aaKnown RBP8.1□□□□□ -1.11
COL9A1-209ENST00000489861 DMC1Q14565 340 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 MTERF2Q49AM1 385 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 USP39Q53GS9 565 aaKnown RBP8.1□□□□□ -1.11
COL9A1-209ENST00000489861 STXBP5Q5T5C0 1151 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 CYP4A22Q5TCH4 519 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 TYW1BQ6NUM6 668 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 NFXL1Q6ZNB6 911 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 SYT13Q7L8C5 426 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 SYT12Q8IV01 421 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 ARID3BQ8IVW6 561 aaPredicted RBP8.1□□□□□ -1.11
COL9A1-209ENST00000489861 MINDY1Q8N5J2 469 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 ZNF713Q8N859 430 aaPredicted RBP8.1□□□□□ -1.11
COL9A1-209ENST00000489861 FRMD1Q8N878 549 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 CNNM3Q8NE01 707 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 RPLP0P6Q8NHW5 317 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 EZH1Q92800 747 aaPredicted RBP8.1□□□□□ -1.11
COL9A1-209ENST00000489861 E2F7Q96AV8 911 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 FNBP1Q96RU3 617 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 ANO3Q9BYT9 981 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 CXCL16Q9H2A7 254 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 FZD8Q9H461 694 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 NXF3Q9H4D5 531 aaKnown RBP8.1□□□□□ -1.11
COL9A1-209ENST00000489861 KLK14Q9P0G3 267 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 CEP72Q9P209 647 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 TCEAL9Q9UHQ7 104 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 GIT1Q9Y2X7 761 aa8.1□□□□□ -1.11
COL9A1-209ENST00000489861 TLN1Q9Y490 2541 aaKnown RBP8.1□□□□□ -1.11
COL9A1-209ENST00000489861 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 E7EWF7 191 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 PRRG1O14668 218 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 TRDMT1O14717 391 aaKnown RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 TNFRSF10BO14763 440 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 GJB3O75712 270 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ABLIM3O94929 683 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 CYP21A2P08686 494 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ITPKAP23677 461 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 CHMLP26374 656 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ZNF76P36508 570 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 SREBF1P36956 1147 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 EIF2S3P41091 472 aaKnown RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 DNM2P50570 870 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ATXN3P54252 364 aaPredicted RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 EPHA5P54756 1037 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ROR1Q01973 937 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 GRSF1Q12849 480 aaKnown RBP eCLIP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 MAPK6Q16659 721 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ITPRIPL2Q3MIP1 535 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ARHGAP29Q52LW3 1261 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 PEAR1Q5VY43 1037 aaPredicted RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 CENPQQ7L2Z9 268 aaPredicted RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 C11orf74Q86VG3 221 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ZNF461Q8TAF7 563 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 RLN3Q8WXF3 142 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 DDX27Q96GQ7 796 aaKnown RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 CPB2Q96IY4 423 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 ZNF577Q9BSK1 485 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 NIFKQ9BYG3 293 aaKnown RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 SLITRK6Q9H5Y7 841 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 CAPN10Q9HC96 672 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 TBC1D22BQ9NU19 505 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 RBM28Q9NW13 759 aaKnown RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 KCNK4Q9NYG8 393 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 PILRBQ9UKJ0 227 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 APOBEC2Q9Y235 224 aaKnown RBP8.09□□□□□ -1.11
COL9A1-209ENST00000489861 SAMM50Q9Y512 469 aa8.09□□□□□ -1.11
COL9A1-209ENST00000489861 INSL5Q9Y5Q6 135 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms