RNA–Protein interactions for RNA: ENST00000489544.1

SF1-218, Transcript of splicing factor 1, humanhuman

TSL 2

Gene SF1, Length 584 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-218ENST00000489544 DCAF17Q5H9S7 520 aaPredicted RBP8.95□□□□□ -0.98
SF1-218ENST00000489544 FAM171A1Q5VUB5 890 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 TCERG1LQ5VWI1 586 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 TDRD10Q5VZ19 366 aaKnown RBP8.95□□□□□ -0.98
SF1-218ENST00000489544 PLPP4Q5VZY2 271 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 FUT10Q6P4F1 479 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 DCLRE1AQ6PJP8 1040 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 INTS8Q75QN2 995 aaKnown RBP8.95□□□□□ -0.98
SF1-218ENST00000489544 TRAPPC11Q7Z392 1133 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 FILIP1Q7Z7B0 1213 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 VPS52Q8N1B4 723 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 MICALL1Q8N3F8 863 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 TMC2Q8TDI7 906 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 DDX27Q96GQ7 796 aaKnown RBP8.95□□□□□ -0.98
SF1-218ENST00000489544 ANKRD36BP1Q96IX9 119 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 MKNK1Q9BUB5 465 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 DACH1Q9UI36 760 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 TIMM13Q9Y5L4 95 aaPredicted RBP8.95□□□□□ -0.98
SF1-218ENST00000489544 RALGAPA2Q2PPJ7 1873 aa8.95□□□□□ -0.98
SF1-218ENST00000489544 COL4A4P53420 1690 aaPredicted RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 PDCD11Q14690 1871 aaKnown RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 PLXNA4Q9HCM2 1894 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 HIDE1A8MVS5 230 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 MAPK13O15264 365 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 SLC16A3O15427 465 aaKnown RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 XPOTO43592 962 aaKnown RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 VNN1O95497 513 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 EFEMP2O95967 443 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 TNNC2P02585 160 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 CCDC192P0DO97 292 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 KRT13P13646 458 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 ERCC5P28715 1186 aaPredicted RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 TKTP29401 623 aaKnown RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 RPL9P32969 192 aaKnown RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 CDR1P51861 262 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 CLDN10P78369 228 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 KRT17Q04695 432 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 BIRC3Q13489 604 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 TPD52L1Q16890 204 aaPredicted RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 CBWD6Q4V339 395 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 CBWD3Q5JTY5 395 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 RTP2Q5QGT7 225 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 CBWD5Q5RIA9 395 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 FOXR2Q6PJQ5 311 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 PRSS55Q6UWB4 352 aaPredicted RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 SV2AQ7L0J3 742 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 TMC7Q7Z402 723 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 ADGRD2Q7Z7M1 963 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 DDX53Q86TM3 631 aaKnown RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 CEP57Q86XR8 500 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 NT5DC4Q86YG4 428 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 RNF168Q8IYW5 571 aaPredicted RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 AOPEPQ8N6M6 819 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 MICAL1Q8TDZ2 1067 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 TAS1R2Q8TE23 839 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 CACTINQ8WUQ7 758 aaKnown RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 CNOT6LQ96LI5 555 aaKnown RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 CEP63Q96MT8 703 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 UROC1Q96N76 676 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 TCF25Q9BQ70 676 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 PI4K2AQ9BTU6 479 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 ZBP1Q9H171 429 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 ENTPD7Q9NQZ7 604 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 TLR9Q9NR96 1032 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 ARMCX3Q9UH62 379 aaPredicted RBP8.94□□□□□ -0.98
SF1-218ENST00000489544 NFE2L3Q9Y4A8 694 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 NUB1Q9Y5A7 615 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 MTCH2Q9Y6C9 303 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 MYO9BQ13459 2157 aa8.94□□□□□ -0.98
SF1-218ENST00000489544 TMEM189-UBE2V1I3L0A0 370 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 DLL1O00548 723 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 FSCN2O14926 492 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 PER2O15055 1255 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 ADAM12O43184 909 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 PHACTR2O75167 634 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 LETM1O95202 739 aaPredicted RBP8.93□□□□□ -0.98
SF1-218ENST00000489544 CXCL14O95715 111 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 SOD2P04179 222 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 RPL17P18621 184 aaKnown RBP8.93□□□□□ -0.98
SF1-218ENST00000489544 GTF2F1P35269 517 aaKnown RBP eCLIP8.93□□□□□ -0.98
SF1-218ENST00000489544 LILRA4P59901 499 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 MYL6P60660 151 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 RBP5P82980 135 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 RBM10P98175 930 aaKnown RBP8.93□□□□□ -0.98
SF1-218ENST00000489544 NCAPHQ15003 741 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 CCDC85BQ15834 202 aaPredicted RBP8.93□□□□□ -0.98
SF1-218ENST00000489544 SPOPLQ6IQ16 392 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 GPR153Q6NV75 609 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 C15orf39Q6ZRI6 1047 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 FRMD5Q7Z6J6 570 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 RBM23Q86U06 439 aaKnown RBP8.93□□□□□ -0.98
SF1-218ENST00000489544 GLYCTKQ8IVS8 523 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 TRIM59Q8IWR1 403 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 DHX40Q8IX18 779 aaKnown RBP8.93□□□□□ -0.98
SF1-218ENST00000489544 ENOX1Q8TC92 643 aaKnown RBP8.93□□□□□ -0.98
SF1-218ENST00000489544 PPM1EQ8WY54 764 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 RIN2Q8WYP3 895 aaPredicted RBP8.93□□□□□ -0.98
SF1-218ENST00000489544 SEMA4DQ92854 862 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 SLC35C1Q96A29 364 aa8.93□□□□□ -0.98
SF1-218ENST00000489544 MRPL38Q96DV4 380 aaKnown RBP8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms