RNA–Protein interactions for RNA: ENST00000489451.1

ACTN4-206, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-206ENST00000489451 SYN3O14994 580 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 MAPTP10636 758 aaKnown RBP12.86□□□□□ -0.35
ACTN4-206ENST00000489451 HARSP12081 509 aaKnown RBP12.86□□□□□ -0.35
ACTN4-206ENST00000489451 ATF2P15336 505 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 CD72P21854 359 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 CACNB1Q02641 598 aaPredicted RBP12.86□□□□□ -0.35
ACTN4-206ENST00000489451 DMWDQ09019 674 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 FZD5Q13467 585 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 TMEM119Q4V9L6 283 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 SLC44A4Q53GD3 710 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 ARSHQ5FYA8 562 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 KRT79Q5XKE5 535 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 TANGO2Q6ICL3 276 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 RTL10Q7L3V2 364 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 ZNF687Q8N1G0 1237 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 SYT2Q8N9I0 419 aaPredicted RBP12.86□□□□□ -0.35
ACTN4-206ENST00000489451 SPIRE2Q8WWL2 714 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 MCRS1Q96EZ8 462 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 SUSD3Q96L08 255 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 DRC1Q96MC2 740 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 ACAP3Q96P50 834 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 PLIN2Q99541 437 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 TOPORSQ9NS56 1045 aaPredicted RBP12.86□□□□□ -0.35
ACTN4-206ENST00000489451 SLC38A7Q9NVC3 462 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 MRPS23Q9Y3D9 190 aaKnown RBP12.86□□□□□ -0.35
ACTN4-206ENST00000489451 TICRRQ7Z2Z1 1910 aa12.86□□□□□ -0.35
ACTN4-206ENST00000489451 KANSL1LA0AUZ9 987 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 TRAPPC3O43617 180 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 FAM189A1O60320 539 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 CXCL8P10145 99 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 PLS3P13797 630 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 TARSP26639 723 aaKnown RBP12.85□□□□□ -0.35
ACTN4-206ENST00000489451 YARSP54577 528 aaKnown RBP12.85□□□□□ -0.35
ACTN4-206ENST00000489451 SPAG1Q07617 926 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 MCL1Q07820 350 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 ZBTB6Q15916 424 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 ZBTB41Q5SVQ8 909 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 DTHD1Q6ZMT9 781 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 TCEAL8Q8IYN2 117 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 HS6ST3Q8IZP7 471 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 DDX12PQ92771 950 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 KCNN1Q92952 543 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 ZSWIM3Q96MP5 696 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 TBC1D32Q96NH3 1257 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 RAB34Q9BZG1 259 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 CRISPLD1Q9H336 500 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 C17orf75Q9HAS0 396 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 LTB4R2Q9NPC1 389 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 ANKFY1Q9P2R3 1169 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 DAXXQ9UER7 740 aaPredicted RBP12.85□□□□□ -0.35
ACTN4-206ENST00000489451 RBM19Q9Y4C8 960 aaKnown RBP12.85□□□□□ -0.35
ACTN4-206ENST00000489451 INSL5Q9Y5Q6 135 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 STK24Q9Y6E0 443 aa12.85□□□□□ -0.35
ACTN4-206ENST00000489451 GPR179Q6PRD1 2367 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 ECI2O75521 394 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 TOM1L1O75674 476 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 ADRB1P08588 477 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 RFX1P22670 979 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 RPL9P32969 192 aaKnown RBP12.84□□□□□ -0.35
ACTN4-206ENST00000489451 TNFSF9P41273 254 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 GUCY2FP51841 1108 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 NCKAP1LP55160 1127 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 ARPP19P56211 112 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 PRKCQQ04759 706 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 NOLC1Q14978 699 aaKnown RBP eCLIP12.84□□□□□ -0.35
ACTN4-206ENST00000489451 APBB1IPQ7Z5R6 666 aaPredicted RBP12.84□□□□□ -0.35
ACTN4-206ENST00000489451 DCLK2Q8N568 766 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 BEST2Q8NFU1 509 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 CORO1BQ9BR76 489 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 TIPINQ9BVW5 301 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 HEBP1Q9NRV9 189 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 GDE1Q9NZC3 331 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 CEP72Q9P209 647 aa12.84□□□□□ -0.35
ACTN4-206ENST00000489451 SPTBN2O15020 2390 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 TTC26A0AVF1 554 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 VWA3AA6NCI4 1184 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 PPEF2O14830 753 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 LRG1P02750 347 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 OR4Q2P0C623 313 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 PLA2G4BP0C869 781 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 GJA1P17302 382 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 PTPN2P17706 415 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 AARSP49588 968 aaKnown RBP eCLIP12.83□□□□□ -0.36
ACTN4-206ENST00000489451 ATXN1P54253 815 aaKnown RBP12.83□□□□□ -0.36
ACTN4-206ENST00000489451 GRIN1Q05586 938 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 GRM2Q14416 872 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 UBXN2BQ14CS0 331 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 RABEP1Q15276 862 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 ZRSR1Q15695 479 aaKnown RBP12.83□□□□□ -0.36
ACTN4-206ENST00000489451 CTXN3Q4LDR2 81 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 FAM78AQ5JUQ0 283 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 SLC39A4Q6P5W5 647 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 ZC3H14Q6PJT7 736 aaKnown RBP12.83□□□□□ -0.36
ACTN4-206ENST00000489451 ZPBP2Q6X784 338 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 RNF19BQ6ZMZ0 732 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 TPRG1Q6ZUI0 275 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 SUMF1Q8NBK3 374 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 CLDN23Q96B33 292 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 ELSPBP1Q96BH3 223 aa12.83□□□□□ -0.36
ACTN4-206ENST00000489451 SHDQ96IW2 340 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms