RNA–Protein interactions for RNA: ENST00000489417.5

SND1-214, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 2

Gene SND1, Length 1,447 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-214ENST00000489417 CCDC170Q8IYT3 715 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 SEPT8Q92599 483 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 C18orf25Q96B23 403 aaPredicted RBP22.44■■□□□ 1.18
SND1-214ENST00000489417 NIF3L1Q9GZT8 377 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 WNT8AQ9H1J5 351 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 TMEM39AQ9NV64 488 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 AGAP1Q9UPQ3 857 aa22.44■■□□□ 1.18
SND1-214ENST00000489417 BZW2Q9Y6E2 419 aaKnown RBP22.44■■□□□ 1.18
SND1-214ENST00000489417 SSU72P8A0A1W2PR75 194 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 PTGESO14684 152 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 EVI5O60447 810 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 CLTBP09497 229 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 CCDC172P0C7W6 258 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 CYP2C18P33260 490 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 CYLC1P35663 651 aaPredicted RBP22.43■■□□□ 1.18
SND1-214ENST00000489417 CCL23P55773 120 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 MAPK8IP2Q13387 824 aaPredicted RBP22.43■■□□□ 1.18
SND1-214ENST00000489417 TOGARAM2Q6ZUX3 1019 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 RTN4RL1Q86UN2 441 aaPredicted RBP22.43■■□□□ 1.18
SND1-214ENST00000489417 RNF169Q8NCN4 708 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 APBB2Q92870 758 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 JAKMIP2Q96AA8 810 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 SCLYQ96I15 445 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 CCDC42Q96M95 316 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 RPS6KC1Q96S38 1066 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 RNF19AQ9NV58 838 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 PDCD11Q14690 1871 aaKnown RBP22.43■■□□□ 1.18
SND1-214ENST00000489417 DNAH12Q6ZR08 3092 aa22.43■■□□□ 1.18
SND1-214ENST00000489417 C9IYK1 514 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 CYP3A5P20815 502 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 IBSPP21815 317 aaPredicted RBP22.42■■□□□ 1.18
SND1-214ENST00000489417 MLH1P40692 756 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 USP8P40818 1118 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 SLC24A5Q71RS6 500 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 ZNF598Q86UK7 904 aaKnown RBP22.42■■□□□ 1.18
SND1-214ENST00000489417 FAM71AQ8IYT1 594 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 C17orf53Q8N3J3 647 aaPredicted RBP22.42■■□□□ 1.18
SND1-214ENST00000489417 DBF4BQ8NFT6 615 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 ZFP42Q96MM3 310 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 GAD1Q99259 594 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 ARID3AQ99856 593 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 TSPYL2Q9H2G4 693 aaPredicted RBP22.42■■□□□ 1.18
SND1-214ENST00000489417 DEF6Q9H4E7 631 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 HAUS4Q9H6D7 363 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 VRTNQ9H8Y1 702 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 RSAD1Q9HA92 442 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 UBN1Q9NPG3 1134 aa22.42■■□□□ 1.18
SND1-214ENST00000489417 EPN1Q9Y6I3 576 aaPredicted RBP22.42■■□□□ 1.18
SND1-214ENST00000489417 NDUFA10O95299 355 aa22.41■■□□□ 1.18
SND1-214ENST00000489417 STAU1O95793 577 aaKnown RBP22.41■■□□□ 1.18
SND1-214ENST00000489417 CXCL10P02778 98 aa22.41■■□□□ 1.18
SND1-214ENST00000489417 ZNF667Q5HYK9 610 aa22.41■■□□□ 1.18
SND1-214ENST00000489417 HPDLQ96IR7 371 aa22.41■■□□□ 1.18
SND1-214ENST00000489417 PPP1R10Q96QC0 940 aaKnown RBP22.41■■□□□ 1.18
SND1-214ENST00000489417 DESI2Q9BSY9 194 aa22.41■■□□□ 1.18
SND1-214ENST00000489417 ARL5CA6NH57 179 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 FAM189BP81408 668 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 FAXDC2Q96IV6 333 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 KCND1Q9NSA2 647 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 SLC38A7Q9NVC3 462 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 ADGRG1Q9Y653 693 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 EIF3CLB5ME19 914 aaKnown RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 AKR1B10O60218 316 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 EOMESO95936 686 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 ACO1P21399 889 aaKnown RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 KIF11P52732 1056 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 PTK2Q05397 1052 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 SOX4Q06945 474 aaPredicted RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 ASTE1Q2TB18 679 aaPredicted RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 C9orf57Q5W0N0 161 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 ZNF571Q7Z3V5 609 aaPredicted RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 CCAR2Q8N163 923 aaKnown RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 LRRC52Q8N7C0 313 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 GSTCDQ8NEC7 633 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 EIF3CQ99613 913 aaKnown RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 NXF1Q9UBU9 619 aaKnown RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 POLIQ9UNA4 740 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 PPP2R2CQ9Y2T4 447 aa22.4■■□□□ 1.18
SND1-214ENST00000489417 GTF3C5Q9Y5Q8 519 aaPredicted RBP22.4■■□□□ 1.18
SND1-214ENST00000489417 TRIP11Q15643 1979 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 ANO9A1A5B4 782 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 PPEF2O14830 753 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 OFD1O75665 1012 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 THP07101 528 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 KRT5P13647 590 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 P4HA1P13674 534 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 ANXA13P27216 316 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 ASPAP45381 313 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 SCNN1GP51170 649 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 MYO1EQ12965 1108 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 WDR72Q3MJ13 1102 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 SMYD5Q6GMV2 418 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 SCARA5Q6ZMJ2 495 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 UBR7Q8N806 425 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 ACRBPQ8NEB7 543 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 SPTLC3Q9NUV7 552 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 MIOSQ9NXC5 875 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 PCDHB4Q9Y5E5 795 aa22.39■■□□□ 1.17
SND1-214ENST00000489417 PIRO00625 290 aa22.38■■□□□ 1.17
SND1-214ENST00000489417 ENPP3O14638 875 aa22.38■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms