RNA–Protein interactions for RNA: ENST00000489352.5

HDAC6-233, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-233ENST00000489352 GSTCDQ8NEC7 633 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 TSTD1Q8NFU3 115 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 RPLP0P6Q8NHW5 317 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 ACDQ96AP0 544 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 ARID3AQ99856 593 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 TPCN1Q9ULQ1 816 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 NCANO14594 1321 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 SALL3Q9BXA9 1300 aa12.8□□□□□ -0.36
HDAC6-233ENST00000489352 ZNF638Q14966 1978 aaKnown RBP12.8□□□□□ -0.36
HDAC6-233ENST00000489352 TNRC6BQ9UPQ9 1833 aaKnown RBP12.79□□□□□ -0.36
HDAC6-233ENST00000489352 INO80B-WBP1J3KQ70 363 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 ASAP2O43150 1006 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 TSPAN1O60635 241 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 ATF2P15336 505 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 RXRAP19793 462 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 ROR1Q01973 937 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 FBXO43Q4G163 708 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 FSTL4Q6MZW2 842 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 ARMCX6Q7L4S7 300 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 MIER3Q7Z3K6 550 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 KRT25Q7Z3Z0 450 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 TTC30AQ86WT1 665 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 TCEAL8Q8IYN2 117 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 TMTC2Q8N394 836 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 IGDCC4Q8TDY8 1250 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 TMEM143Q96AN5 459 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 RSPRY1Q96DX4 576 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 TEKT3Q9BXF9 490 aa12.79□□□□□ -0.36
HDAC6-233ENST00000489352 TNFRSF10BO14763 440 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 B3GAT3O94766 335 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 ABLIM3O94929 683 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 NPTXRO95502 500 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 EGFP01133 1207 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 DRD1P21728 446 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 TWF1Q12792 350 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 LMBRD2Q68DH5 695 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-233ENST00000489352 SLC27A1Q6PCB7 646 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 TOGARAM2Q6ZUX3 1019 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 CEP76Q8TAP6 659 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 TCP11Q8WWU5 503 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 SPACA7Q96KW9 195 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 CEP89Q96ST8 783 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 POLMQ9NP87 494 aaPredicted RBP12.78□□□□□ -0.36
HDAC6-233ENST00000489352 SLC6A14Q9UN76 642 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 ZMYM2Q9UBW7 1377 aa12.78□□□□□ -0.36
HDAC6-233ENST00000489352 ARID2Q68CP9 1835 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 A0A1W2PRU2 124 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 TRABD2BA6NFA1 517 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 TRDMT1O14717 391 aaKnown RBP12.77□□□□□ -0.37
HDAC6-233ENST00000489352 SH3BP5O60239 455 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 MOSPD3O75425 235 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 PRKCBP05771 671 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 BCKDHBP21953 392 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 TKTP29401 623 aaKnown RBP12.77□□□□□ -0.37
HDAC6-233ENST00000489352 DUOXA1Q1HG43 343 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 LRCH2Q5VUJ6 765 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 MINDY1Q8N5J2 469 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 RDM1Q8NG50 284 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 SHKBP1Q8TBC3 707 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 BPIFB1Q8TDL5 484 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 CAMK1GQ96NX5 476 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 FCRL3Q96P31 734 aaPredicted RBP12.77□□□□□ -0.37
HDAC6-233ENST00000489352 RIT2Q99578 217 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 UNC45AQ9H3U1 944 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 TMEM74BQ9NUR3 256 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 OBP2AQ9NY56 170 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 TEP1Q99973 2627 aaKnown RBP12.77□□□□□ -0.37
HDAC6-233ENST00000489352 COL6A6A6NMZ7 2263 aa12.77□□□□□ -0.37
HDAC6-233ENST00000489352 MYO16Q9Y6X6 1858 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 hCG_1984214I3L0E3 225 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 SEC24AO95486 1093 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 SYPP08247 313 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 CD59P13987 128 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 CLK2P49760 499 aaKnown RBP12.76□□□□□ -0.37
HDAC6-233ENST00000489352 SRSF1Q07955 248 aaKnown RBP eCLIP12.76□□□□□ -0.37
HDAC6-233ENST00000489352 SLC14A1Q13336 389 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 ARHGAP15Q53QZ3 475 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 TAF1BQ53T94 588 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-233ENST00000489352 LYSMD4Q5XG99 296 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 TPGS2Q68CL5 300 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 PLA2G4FQ68DD2 849 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 ANO7Q6IWH7 933 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 SLC8B1Q6J4K2 584 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 RABEPKQ7Z6M1 372 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 ZNF713Q8N859 430 aaPredicted RBP12.76□□□□□ -0.37
HDAC6-233ENST00000489352 CCDC26Q8TAB7 109 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 DDX27Q96GQ7 796 aaKnown RBP12.76□□□□□ -0.37
HDAC6-233ENST00000489352 CEP170P1Q96L14 293 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 PRORYQ9H606 182 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 CEP72Q9P209 647 aa12.76□□□□□ -0.37
HDAC6-233ENST00000489352 ATXN2Q99700 1313 aaKnown RBP12.76□□□□□ -0.37
HDAC6-233ENST00000489352 TEX51A0A1B0GUA7 166 aa12.75□□□□□ -0.37
HDAC6-233ENST00000489352 E7EWF7 191 aa12.75□□□□□ -0.37
HDAC6-233ENST00000489352 H7C4K7 107 aa12.75□□□□□ -0.37
HDAC6-233ENST00000489352 RRP8O43159 456 aaKnown RBP12.75□□□□□ -0.37
HDAC6-233ENST00000489352 ALDH1A2O94788 518 aa12.75□□□□□ -0.37
HDAC6-233ENST00000489352 WISP1O95388 367 aa12.75□□□□□ -0.37
HDAC6-233ENST00000489352 ARF4P18085 180 aaPredicted RBP12.75□□□□□ -0.37
HDAC6-233ENST00000489352 EPHA5P54756 1037 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms