RNA–Protein interactions for RNA: ENST00000489241.1

XRN1-213, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 393 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-213ENST00000489241 HK3P52790 923 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 RAB1AP62820 205 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 GPSM2P81274 684 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 STK3Q13188 491 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 CRHR2Q13324 411 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 IFIT5Q13325 482 aaKnown RBP5.31□□□□□ -1.56
XRN1-213ENST00000489241 THEMIS2Q5TEJ8 643 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 APOA5Q6Q788 366 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 Q6ZVL8 140 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 APBB1IPQ7Z5R6 666 aaPredicted RBP5.31□□□□□ -1.56
XRN1-213ENST00000489241 RHOT1Q8IXI2 618 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 DRC7Q8IY82 874 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 ANKRD35Q8N283 1001 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 PQLC1Q8N2U9 271 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 ZNF483Q8TF39 744 aaPredicted RBP5.31□□□□□ -1.56
XRN1-213ENST00000489241 C22orf23Q9BZE7 217 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 SENP6Q9GZR1 1112 aaPredicted RBP5.31□□□□□ -1.56
XRN1-213ENST00000489241 ENKD1Q9H0I2 346 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 NUP62CLQ9H1M0 184 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 LANCL2Q9NS86 450 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 TMEM140Q9NV12 185 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 CEP72Q9P209 647 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 TRPS1Q9UHF7 1281 aa5.31□□□□□ -1.56
XRN1-213ENST00000489241 SGTAO43765 313 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 MGEA5O60502 916 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 MFAP3LO75121 409 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 ADH4P08319 380 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 MYF5P13349 255 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 SLC6A9P48067 706 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 NKX6-1P78426 367 aaPredicted RBP5.3□□□□□ -1.56
XRN1-213ENST00000489241 DPTQ07507 201 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 TARDBPQ13148 414 aaKnown RBP eCLIP5.3□□□□□ -1.56
XRN1-213ENST00000489241 NOGQ13253 232 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 MRPL49Q13405 166 aaKnown RBP5.3□□□□□ -1.56
XRN1-213ENST00000489241 KRT72Q14CN4 511 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 POLD3Q15054 466 aaPredicted RBP5.3□□□□□ -1.56
XRN1-213ENST00000489241 FAM47AQ5JRC9 791 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 FKBP15Q5T1M5 1219 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 FNDC7Q5VTL7 733 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 SPTY2D1Q68D10 685 aaPredicted RBP5.3□□□□□ -1.56
XRN1-213ENST00000489241 RSPH3Q86UC2 560 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 TMPRSS6Q8IU80 811 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 LILRA3Q8N6C8 439 aaPredicted RBP5.3□□□□□ -1.56
XRN1-213ENST00000489241 ACRBPQ8NEB7 543 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 DEPTORQ8TB45 409 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 CCHCR1Q8TD31 782 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 NEU4Q8WWR8 484 aaPredicted RBP5.3□□□□□ -1.56
XRN1-213ENST00000489241 RAB24Q969Q5 203 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 CHFRQ96EP1 664 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 APIPQ96GX9 242 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 CLPTM1LQ96KA5 538 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 ARMT1Q9H993 441 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 TDP1Q9NUW8 608 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 PARPBPQ9NWS1 579 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 MOCS1Q9NZB8 636 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 HDAC5Q9UQL6 1122 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 SIK3Q9Y2K2 1263 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 SH3BP1Q9Y3L3 701 aa5.3□□□□□ -1.56
XRN1-213ENST00000489241 TEX33O43247 280 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 HOXA3O43365 443 aaPredicted RBP5.29□□□□□ -1.56
XRN1-213ENST00000489241 FRS3O43559 492 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 EIF5BO60841 1220 aaKnown RBP5.29□□□□□ -1.56
XRN1-213ENST00000489241 PPFIA4O75335 1185 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 FGAP02671 866 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 GNAT2P19087 354 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 MAKP20794 623 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 FLT3LGP49771 235 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 INHBCP55103 352 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 CDC42EP1Q00587 391 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 SP140Q13342 867 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 FGL2Q14314 439 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 TMEM95Q3KNT9 176 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 CCDC157Q569K6 752 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 HSP90AB4PQ58FF6 505 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 ANO1Q5XXA6 986 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 TMED8Q6PL24 325 aaPredicted RBP5.29□□□□□ -1.56
XRN1-213ENST00000489241 FAM83AQ86UY5 434 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 OR2C3Q8N628 320 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 C3orf20Q8ND61 904 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 MDM1Q8TC05 714 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 POF1BQ8WVV4 589 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 CASKIN2Q8WXE0 1202 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 PHKBQ93100 1093 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 MRGPRX4Q96LA9 322 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 ZNF512Q96ME7 567 aaPredicted RBP5.29□□□□□ -1.56
XRN1-213ENST00000489241 RIPOR3Q96MK2 946 aa5.29□□□□□ -1.56
XRN1-213ENST00000489241 ZMAT3Q9HA38 289 aaKnown RBP5.29□□□□□ -1.56
XRN1-213ENST00000489241 TRMT13Q9NUP7 481 aaKnown RBP5.29□□□□□ -1.56
XRN1-213ENST00000489241 HECAQ9UBI9 543 aaPredicted RBP5.29□□□□□ -1.56
XRN1-213ENST00000489241 MYBBP1AQ9BQG0 1328 aaKnown RBP5.28□□□□□ -1.56
XRN1-213ENST00000489241 RHPN2P1A8MT19 583 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 F5H423 210 aaPredicted RBP5.28□□□□□ -1.56
XRN1-213ENST00000489241 KPNA5O15131 536 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 PIP5K1CO60331 668 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 IPO13O94829 963 aaKnown RBP5.28□□□□□ -1.56
XRN1-213ENST00000489241 HALP42357 657 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 CASP5P51878 434 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 INHBEP58166 350 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 RAPGEF1Q13905 1077 aa5.28□□□□□ -1.56
XRN1-213ENST00000489241 PLS1Q14651 629 aa5.28□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms