RNA–Protein interactions for RNA: ENST00000489111.1

USP11-211, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 516 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-211ENST00000489111 HPDLQ96IR7 371 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 C16orf45Q96MC5 204 aaPredicted RBP10.75□□□□□ -0.69
USP11-211ENST00000489111 ZNF560Q96MR9 790 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 ARID3AQ99856 593 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 TRAIPQ9BWF2 469 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 XYLT2Q9H1B5 865 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 RNF39Q9H2S5 420 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 HIPK3Q9H422 1215 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 C11orf49Q9H6J7 331 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 SEPT11Q9NVA2 429 aaKnown RBP10.75□□□□□ -0.69
USP11-211ENST00000489111 SLC38A7Q9NVC3 462 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 NXF1Q9UBU9 619 aaKnown RBP10.75□□□□□ -0.69
USP11-211ENST00000489111 TUBGCP4Q9UGJ1 667 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 ATP11BQ9Y2G3 1177 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 NUB1Q9Y5A7 615 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 PCDHB4Q9Y5E5 795 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 UMODL1Q5DID0 1318 aa10.75□□□□□ -0.69
USP11-211ENST00000489111 SMIM28A0A1B0GU29 152 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 KIF2AO00139 706 aaPredicted RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 CYP26A1O43174 497 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 MGEA5O60502 916 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 CST3P01034 146 aaPredicted RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 COL6A1P12109 1028 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 CAPN2P17655 700 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 CD58P19256 250 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 MLH1P40692 756 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 MNX1P50219 401 aaPredicted RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 CYP27A1Q02318 531 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 TLE2Q04725 743 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 GFPT1Q06210 699 aaPredicted RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 BMS1Q14692 1282 aaKnown RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 MBTPS1Q14703 1052 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 PTPN14Q15678 1187 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 SLC18A3Q16572 532 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 WDR72Q3MJ13 1102 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 XKR4Q5GH76 650 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 ALKAL1Q6UXT8 129 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 ZNF571Q7Z3V5 609 aaPredicted RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 MRPL10Q7Z7H8 261 aaKnown RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 LRRC52Q8N7C0 313 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 RBBP8NLQ8NC74 664 aaPredicted RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 SEPT8Q92599 483 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 C18orf25Q96B23 403 aaPredicted RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 FAXDC2Q96IV6 333 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 ZMAT2Q96NC0 199 aaKnown RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 TOX2Q96NM4 488 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 FTHL17Q9BXU8 183 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 OSBPL7Q9BZF2 842 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 TSGA10Q9BZW7 698 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 UBN1Q9NPG3 1134 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 LZTFL1Q9NQ48 299 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 RRAGDQ9NQL2 400 aaPredicted RBP10.74□□□□□ -0.69
USP11-211ENST00000489111 ADAMTS1Q9UHI8 967 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 GIT1Q9Y2X7 761 aa10.74□□□□□ -0.69
USP11-211ENST00000489111 FRMPD3Q5JV73 1810 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 A0A0U1RQF3 1178 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 RBAK-RBAKDNI3L0D1 243 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 KRT86O43790 486 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 ZNF623O75123 536 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 LCA5LO95447 670 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 PARNO95453 639 aaKnown RBP10.73□□□□□ -0.69
USP11-211ENST00000489111 STAU1O95793 577 aaKnown RBP10.73□□□□□ -0.69
USP11-211ENST00000489111 CYP3A5P20815 502 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 TNFAIP3P21580 790 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 PNPLA4P41247 253 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 MAGEA1P43355 309 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 ASPAP45381 313 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 VAV2P52735 878 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 KIF5AQ12840 1032 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 ASTE1Q2TB18 679 aaPredicted RBP10.73□□□□□ -0.69
USP11-211ENST00000489111 C10orf76Q5T2E6 689 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 C1orf53Q5VUE5 145 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 SMYD5Q6GMV2 418 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 TMEM270Q6UE05 265 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 FAM43BQ6ZT52 329 aaPredicted RBP10.73□□□□□ -0.69
USP11-211ENST00000489111 ECHDC2Q86YB7 292 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 GLYCTKQ8IVS8 523 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 REXO1L1PQ8IX06 675 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 EPS8L1Q8TE68 723 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 APBB2Q92870 758 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 LPPQ93052 612 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 ZFP42Q96MM3 310 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 GAD1Q99259 594 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 AGPAT1Q99943 283 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 PPP1R12CQ9BZL4 782 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 VRTNQ9H8Y1 702 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 RSAD1Q9HA92 442 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 CYP3A43Q9HB55 503 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 POLIQ9UNA4 740 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 REXO2Q9Y3B8 237 aaKnown RBP10.73□□□□□ -0.69
USP11-211ENST00000489111 PCDHA13Q9Y5I0 950 aa10.73□□□□□ -0.69
USP11-211ENST00000489111 EVPLQ92817 2033 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 A0A087X0T9 212 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 ARL5CA6NH57 179 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 PTGESO14684 152 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 KIF5CO60282 957 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 THP07101 528 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 WEE2P0C1S8 567 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 FAM228BP0C875 321 aa10.72□□□□□ -0.69
USP11-211ENST00000489111 CYP11B1P15538 503 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms