RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 FGFBP2Q9BYJ0 223 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 IKZF4Q9H2S9 585 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 PCIF1Q9H4Z3 704 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 C2CD2Q9Y426 696 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 NR2E1Q9Y466 385 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 BACE2Q9Y5Z0 518 aa15.49■□□□□ 0.07
BRCA1-218ENST00000489037 FAM237AA0A1B0GTK4 181 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 C19orf67A6NJJ6 358 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 SPATA31D3P0C874 917 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 OR1D2P34982 312 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 SNRPFP62306 86 aaKnown RBP15.48■□□□□ 0.07
BRCA1-218ENST00000489037 LIN9Q5TKA1 542 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 KANK3Q6NY19 840 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 CD300LGQ6UXG3 332 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 CYP26C1Q6V0L0 522 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 C15orf39Q6ZRI6 1047 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 SPATA31D4Q6ZUB0 917 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 HS2ST1Q7LGA3 356 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 GPR149Q86SP6 731 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 GPD1LQ8N335 351 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 KREMEN2Q8NCW0 462 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 CMASQ8NFW8 434 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-218ENST00000489037 CLSTN3Q9BQT9 956 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 PIDD1Q9HB75 910 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 KIAA1586Q9HCI6 787 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 SLC39A2Q9NP94 309 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 RBAKQ9NYW8 714 aaPredicted RBP15.48■□□□□ 0.07
BRCA1-218ENST00000489037 MTRRQ9UBK8 725 aa15.48■□□□□ 0.07
BRCA1-218ENST00000489037 BDP1A6H8Y1 2624 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 C2orf16Q68DN1 1984 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 MYO10Q9HD67 2058 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 CCDC195A0A1B0GUA6 201 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 GOLGA8IPA6NC78 632 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 ZNF233A6NK53 670 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 GOLGA8JA6NMD2 632 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 NFICP08651 508 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 VCANP13611 3396 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 ALADP13716 330 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 SCN1AP35498 2009 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 ANP32AP39687 249 aaKnown RBP15.47■□□□□ 0.07
BRCA1-218ENST00000489037 RAB33AQ14088 237 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 SURF1Q15526 300 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 VARS2Q5ST30 1063 aaKnown RBP15.47■□□□□ 0.07
BRCA1-218ENST00000489037 LILRA6Q6PI73 481 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 CRELD2Q6UXH1 353 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-218ENST00000489037 EPM2AIP1Q7L775 607 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-218ENST00000489037 USP37Q86T82 979 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 BRSK2Q8IWQ3 736 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 NELFCDQ8IXH7 590 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 GLIS3Q8NEA6 775 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 CBWD1Q9BRT8 395 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 CD320Q9NPF0 282 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 TSHZ2Q9NRE2 1034 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 ZDHHC7Q9NXF8 308 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 DPP3Q9NY33 737 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 CGNQ9P2M7 1197 aaKnown RBP15.47■□□□□ 0.07
BRCA1-218ENST00000489037 CIZ1Q9ULV3 898 aaPredicted RBP15.47■□□□□ 0.07
BRCA1-218ENST00000489037 PCDHB8Q9UN66 801 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 R3HCC1Q9Y3T6 440 aaKnown RBP15.47■□□□□ 0.07
BRCA1-218ENST00000489037 CDY1Q9Y6F8 540 aa15.47■□□□□ 0.07
BRCA1-218ENST00000489037 LOC730098B7Z3J9 87 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 ZNF202O95125 648 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 KIF20AO95235 890 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 WEE2P0C1S8 567 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 IGFBP6P24592 240 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-218ENST00000489037 ELF1P32519 619 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 GUCY2FP51841 1108 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 TFAMQ00059 246 aaKnown RBP15.46■□□□□ 0.07
BRCA1-218ENST00000489037 EHHADHQ08426 723 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 KMT5BQ4FZB7 885 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 CTXN3Q4LDR2 81 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 PPM1LQ5SGD2 360 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 C9orf57Q5W0N0 161 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 ZNF280DQ6N043 979 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 KRBA2Q6ZNG9 492 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 GOLGA5Q8TBA6 731 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 SCFD1Q8WVM8 642 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 SMG7Q92540 1137 aaKnown RBP15.46■□□□□ 0.07
BRCA1-218ENST00000489037 OXCT2Q9BYC2 517 aaPredicted RBP15.46■□□□□ 0.07
BRCA1-218ENST00000489037 POMKQ9H5K3 350 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 HSPBP1Q9NZL4 362 aa15.46■□□□□ 0.07
BRCA1-218ENST00000489037 M0QZQ0 153 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 ZMYND10O75800 440 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 RPN1P04843 607 aaKnown RBP15.45■□□□□ 0.06
BRCA1-218ENST00000489037 ARPP19P56211 112 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 YWHAHQ04917 246 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-218ENST00000489037 KNOP1Q1ED39 458 aaKnown RBP15.45■□□□□ 0.06
BRCA1-218ENST00000489037 UVSSAQ2YD98 709 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 CCDC149Q6ZUS6 474 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 RTL10Q7L3V2 364 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 ACSF2Q96CM8 615 aaPredicted RBP15.45■□□□□ 0.06
BRCA1-218ENST00000489037 C1QTNF1Q9BXJ1 281 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 RHOBTB2Q9BYZ6 727 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 FBXW11Q9UKB1 542 aa15.45■□□□□ 0.06
BRCA1-218ENST00000489037 PIRO00625 290 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 CLIC2O15247 247 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 KLRC4O43908 158 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 XYLBO75191 536 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 RFPL2O75678 378 aa15.44■□□□□ 0.06
BRCA1-218ENST00000489037 C8AP07357 584 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms