RNA–Protein interactions for RNA: ENST00000488961.5

BEST3-205, Transcript of bestrophin 3, humanhuman

TSL 1 (best) BASIC

Gene BEST3, Length 2,878 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-205ENST00000488961 WDR81Q562E7 1941 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 GMNCA6NCL1 334 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 SMAPO00193 183 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 DDNO94850 711 aaPredicted RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 LUC7L3O95232 432 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 PLS3P13797 630 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 IFNAR2P48551 515 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 HSD17B4P51659 736 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 TTLL12Q14166 644 aaPredicted RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 SMAD1Q15797 465 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 MOXD1Q6UVY6 613 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 ARHGAP27Q6ZUM4 889 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 ANKRD35Q8N283 1001 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 RNF10Q8N5U6 811 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 MIPOL1Q8TD10 442 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 ZNF516Q92618 1163 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 NAF1Q96HR8 494 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 TARS2Q9BW92 718 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 HAPLN2Q9GZV7 340 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 POLR3FQ9H1D9 316 aaPredicted RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 ZNF408Q9H9D4 720 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 TBX20Q9UMR3 447 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 NOVA2Q9UNW9 492 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 BZW2Q9Y6E2 419 aaKnown RBP8.13□□□□□ -1.11
BEST3-205ENST00000488961 ATAD5Q96QE3 1844 aa8.13□□□□□ -1.11
BEST3-205ENST00000488961 ZBED4O75132 1171 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 RFC5P40937 340 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 BPIFB4P59827 614 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 KCNJ2P63252 427 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 DMP1Q13316 513 aaPredicted RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 PABPC1LQ4VXU2 614 aaKnown RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 FAM133BQ5BKY9 247 aaKnown RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 SV2AQ7L0J3 742 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 HOOK3Q86VS8 718 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 CCDC33Q8N5R6 958 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 TMEM161BQ8NDZ6 487 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 FBXO25Q8TCJ0 367 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 CCHCR1Q8TD31 782 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 ACCSQ96QU6 501 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 RPS6KC1Q96S38 1066 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.12□□□□□ -1.11
BEST3-205ENST00000488961 C11orf70Q9BRQ4 267 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 CNOT8Q9UFF9 292 aaKnown RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 TBK1Q9UHD2 729 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 DBR1Q9UK59 544 aaKnown RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 DDX3YO15523 660 aaKnown RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 ACSL3O95573 720 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 PTPRAP18433 802 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 NRLP54845 237 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 TNNC1P63316 161 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 DEUP1Q05D60 604 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 LRRC14Q15048 493 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 KRT71Q3SY84 523 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 TAS1R3Q7RTX0 852 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 SAPCD2Q86UD0 394 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 FAM160B2Q86V87 743 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 ZC3H3Q8IXZ2 948 aaKnown RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 OR5B17Q8NGF7 314 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 EPS8L1Q8TE68 723 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 MAGOHBQ96A72 148 aaKnown RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 OTUD5Q96G74 571 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 XPNPEP1Q9NQW7 623 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 SAE1Q9UBE0 346 aaPredicted RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 TJP2Q9UDY2 1190 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 CD2APQ9Y5K6 639 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 MAP3K6O95382 1288 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 NPTXRO95502 500 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 CREB1P16220 341 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 DESP17661 470 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 YY1P25490 414 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 RAP1GAPP47736 663 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 ZNF131P52739 623 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 POLGP54098 1239 aaPredicted RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 ACTR2P61160 394 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 FMO1Q01740 532 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 PAK2Q13177 524 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 BMT2Q1RMZ1 405 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 TMEM154Q6P9G4 183 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 TMEM270Q6UE05 265 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 CCDC105Q8IYK2 499 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 ASAP3Q8TDY4 903 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 DYDC1Q8WWB3 177 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 IQCDQ96DY2 449 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 NDNQ99608 321 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 DDX23Q9BUQ8 820 aaKnown RBP8.12□□□□□ -1.11
BEST3-205ENST00000488961 MRIQ9BWK5 157 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 MTFR1LQ9H019 292 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 EHMT1Q9H9B1 1298 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 ELP3Q9H9T3 547 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 GDF3Q9NR23 364 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 DMAC2Q9NW81 257 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 CTNNAL1Q9UBT7 734 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 FBXO40Q9UH90 709 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 ANAPC7Q9UJX3 599 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 UBIAD1Q9Y5Z9 338 aa8.12□□□□□ -1.11
BEST3-205ENST00000488961 MYO18AQ92614 2054 aaKnown RBP8.11□□□□□ -1.11
BEST3-205ENST00000488961 CITO14578 2027 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 WEE2P0C1S8 567 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 RRM1P23921 792 aa8.11□□□□□ -1.11
BEST3-205ENST00000488961 ALDH5A1P51649 535 aaPredicted RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms