RNA–Protein interactions for RNA: ENST00000488921.5

SPTLC1-207, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 3

Gene SPTLC1, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-207ENST00000488921 KCNK12Q9HB15 430 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 OLFML3Q9NRN5 406 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 CPSF3Q9UKF6 684 aaKnown RBP15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 AGO2Q9UKV8 859 aaKnown RBP15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 PCDHB8Q9UN66 801 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 POLIQ9UNA4 740 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 DUSP12Q9UNI6 340 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 DERAQ9Y315 318 aa15.01□□□□□ -0.01
SPTLC1-207ENST00000488921 DOCK6Q96HP0 2047 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 CCL16O15467 120 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 N4BP1O75113 896 aaKnown RBP15□□□□□ -0.01
SPTLC1-207ENST00000488921 PPP1R37O75864 691 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 GCNT3O95395 438 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 ZSCAN22P10073 491 aaPredicted RBP15□□□□□ -0.01
SPTLC1-207ENST00000488921 IDEP14735 1019 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 FSHRP23945 695 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 SPAG1Q07617 926 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 POSTNQ15063 836 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 ZBTB6Q15916 424 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 TPGS2Q68CL5 300 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 GRASPQ7Z6J2 395 aaPredicted RBP15□□□□□ -0.01
SPTLC1-207ENST00000488921 ZNF461Q8TAF7 563 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 POMGNT1Q8WZA1 660 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 FAM212AQ96EL1 285 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 ACCSQ96QU6 501 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 MYADMQ96S97 322 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 TNMDQ9H2S6 317 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 ASB7Q9H672 318 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 PCDHB13Q9Y5F0 798 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 STYXL1Q9Y6J8 313 aa15□□□□□ -0.01
SPTLC1-207ENST00000488921 ARHGEF37A1IGU5 675 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 FRMD3A2A2Y4 597 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 WDR27A2RRH5 827 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 ANKRD63C9JTQ0 380 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 M0QZQ0 153 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 PRRG1O14668 218 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 CUTAO60888 179 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 ABLIM3O94929 683 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 F13A1P00488 732 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 LRG1P02750 347 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 YWHAHQ04917 246 aaPredicted RBP14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 MRPL58Q14197 206 aaKnown RBP14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 TMEM132DQ14C87 1099 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 CTXN3Q4LDR2 81 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 ZBTB41Q5SVQ8 909 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 L1TD1Q5T7N2 865 aaKnown RBP14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 SPATA1Q5VX52 437 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 ATL3Q6DD88 541 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 RSPO2Q6UXX9 243 aaPredicted RBP14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 STXBP4Q6ZWJ1 553 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 CCDC65Q8IXS2 484 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 PDILTQ8N807 584 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 KCNG4Q8TDN1 519 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 STRA6Q9BX79 667 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 MFSD1Q9H3U5 465 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 MAFFQ9ULX9 164 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 C2CD2Q9Y426 696 aa14.99□□□□□ -0.01
SPTLC1-207ENST00000488921 A0A087X0B3 334 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 TBC1D4O60343 1298 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 LAMP2P13473 410 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 CPB1P15086 417 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 ATF2P15336 505 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 AARSP49588 968 aaKnown RBP eCLIP14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 ACOT2P49753 483 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 NUBP1P53384 320 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 ARPP19P56211 112 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 AMPD3Q01432 767 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 PABPC1LQ4VXU2 614 aaKnown RBP14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 JADE1Q6IE81 842 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 DSTYKQ6XUX3 929 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 USP37Q86T82 979 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 NT5DC4Q86YG4 428 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 SYCP3Q8IZU3 236 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 PANK2Q9BZ23 570 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 SMOC2Q9H3U7 446 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 MAGEF1Q9HAY2 307 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 PANK4Q9NVE7 773 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 TFIP11Q9UBB9 837 aaKnown RBP14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 FBXL5Q9UKA1 691 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 CDH7Q9ULB5 785 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 KCNH3Q9ULD8 1083 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 NOTCH4Q99466 2003 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 WDFY4Q6ZS81 3184 aa14.98□□□□□ -0.01
SPTLC1-207ENST00000488921 IL18RAPO95256 599 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 LDHAP00338 332 aaKnown RBP14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 ODC1P11926 461 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 FOXD4L5Q5VV16 416 aaPredicted RBP14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 MTSS1LQ765P7 747 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 TCEAL8Q8IYN2 117 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 ELMOD1Q8N336 334 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 IQUBQ8NA54 791 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 FOXD4L4Q8WXT5 416 aaPredicted RBP14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 TMEM206Q9H813 350 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 CYP4F11Q9HBI6 524 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 TBC1D7Q9P0N9 293 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 AFF4Q9UHB7 1163 aaKnown RBP14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 FBXL21Q9UKT6 434 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 CFAP45Q9UL16 551 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 SCN1AP35498 2009 aa14.97□□□□□ -0.01
SPTLC1-207ENST00000488921 TISP43B9A030 160 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 89.9 ms