RNA–Protein interactions for RNA: ENST00000488427.1

ITGB1-214, Transcript of integrin subunit beta 1, humanhuman

TSL 1 (best)

Gene ITGB1, Length 861 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-214ENST00000488427 GOLGA6BA6NDN3 693 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 FTLP02792 175 aaPredicted RBP5.55□□□□□ -1.52
ITGB1-214ENST00000488427 CD1AP06126 327 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 GOLGA6DP0CG33 693 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 CKBP12277 381 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 FPR1P21462 350 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 BMPR1AP36894 532 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 RAB27AP51159 221 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 HSPA2P54652 639 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 TLE1Q04724 770 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 TARDBPQ13148 414 aaKnown RBP eCLIP5.55□□□□□ -1.529e-7■■■■□ 23.1
ITGB1-214ENST00000488427 IL10RAQ13651 578 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 PPP2R5AQ15172 486 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 PTPAQ15257 358 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 KCNV1Q6PIU1 500 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 LRRC55Q6ZSA7 311 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 IL17RDQ8NFM7 739 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 JDP2Q8WYK2 163 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 C1GALT1C1Q96EU7 318 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 MVB12AQ96EY5 273 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 MYEOVQ96EZ4 313 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 CDK5RAP3Q96JB5 506 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 MRGPRX4Q96LA9 322 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 PNKPQ96T60 521 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 AKIP1Q9NQ31 210 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 GOLGA6AQ9NYA3 693 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 ZIM2Q9NZV7 527 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 JKAMPQ9P055 326 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 USP15Q9Y4E8 981 aaPredicted RBP5.55□□□□□ -1.52
ITGB1-214ENST00000488427 POLA1P09884 1462 aaPredicted RBP5.55□□□□□ -1.52
ITGB1-214ENST00000488427 GRIN2BQ13224 1484 aa5.55□□□□□ -1.52
ITGB1-214ENST00000488427 IQSEC2Q5JU85 1478 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 GRXCR1A8MXD5 290 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 CYR61O00622 381 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 GRM6O15303 877 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 ABHD16AO95870 558 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 GCSHP23434 173 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 EDNRBP24530 442 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 TAP1Q03518 808 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 PIGFQ07326 219 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 FAM102AQ5T9C2 384 aaPredicted RBP5.54□□□□□ -1.52
ITGB1-214ENST00000488427 TSHZ3Q63HK5 1081 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 SLC4A10Q6U841 1118 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 UBE3BQ7Z3V4 1068 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 CHPFQ8IZ52 775 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 PRR18Q8N4B5 295 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 ZGPATQ8N5A5 531 aaKnown RBP5.54□□□□□ -1.52
ITGB1-214ENST00000488427 OR56A1Q8NGH5 318 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 KAT5Q92993 513 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 PRRX2Q99811 253 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 MRIQ9BWK5 157 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 CNNM1Q9NRU3 951 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 SERPINB13Q9UIV8 391 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 CHST2Q9Y4C5 530 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 GLI2P10070 1586 aa5.54□□□□□ -1.52
ITGB1-214ENST00000488427 MADDQ8WXG6 1647 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 TCRBV7S2A1N4TA0A589 114 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 TMEM191CA6NGB0 347 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 LEFTY2O00292 366 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 ERN1O75460 977 aaKnown RBP5.53□□□□□ -1.52
ITGB1-214ENST00000488427 CHEK2O96017 543 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 GNAI2P04899 355 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 MALP21145 153 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 DDX6P26196 483 aaKnown RBP eCLIP5.53□□□□□ -1.52
ITGB1-214ENST00000488427 FXR1P51114 621 aaKnown RBP eCLIP5.53□□□□□ -1.52
ITGB1-214ENST00000488427 ZNF844Q08AG5 666 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 NOGQ13253 232 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 KHDC1Q4VXA5 237 aaKnown RBP5.53□□□□□ -1.52
ITGB1-214ENST00000488427 ZNF365Q70YC5 407 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 PDSS2Q86YH6 399 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 COLGALT2Q8IYK4 626 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 CAMKK1Q8N5S9 505 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 TBC1D15Q8TC07 691 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 DDX17Q92841 729 aaKnown RBP5.53□□□□□ -1.52
ITGB1-214ENST00000488427 RHOBTB2Q9BYZ6 727 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 GSTO2Q9H4Y5 243 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 SLC23A1Q9UHI7 598 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 KCNE5Q9UJ90 142 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 MTO1Q9Y2Z2 717 aaKnown RBP5.53□□□□□ -1.52
ITGB1-214ENST00000488427 PCDHB1Q9Y5F3 818 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 WIZO95785 1651 aa5.53□□□□□ -1.52
ITGB1-214ENST00000488427 RIMS1Q86UR5 1692 aaKnown RBP5.53□□□□□ -1.52
ITGB1-214ENST00000488427 TEX14Q8IWB6 1497 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 RAD54L2Q9Y4B4 1467 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 PNPLA7Q6ZV29 1317 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 A0A1B0GTW7 788 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 CDHR4A6H8M9 788 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 NPIPB8E9PQR5 432 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 ERC2O15083 957 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 SLC43A1O75387 559 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 GPANK1O95872 356 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 FOSP01100 380 aaPredicted RBP5.52□□□□□ -1.53
ITGB1-214ENST00000488427 HMGB1P09429 215 aaKnown RBP5.52□□□□□ -1.53
ITGB1-214ENST00000488427 AVPR1BP47901 424 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 PIK3CGP48736 1102 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 HK3P52790 923 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 GUCY1B3Q02153 619 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 MINDY4Q4G0A6 757 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 ATAT1Q5SQI0 421 aa5.52□□□□□ -1.53
ITGB1-214ENST00000488427 MAPKAPK5Q8IW41 473 aa5.52□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms