RNA–Protein interactions for RNA: ENST00000488386.5

CDHR3-213, Transcript of cadherin related family member 3, humanhuman

TSL 3

Gene CDHR3, Length 540 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-213ENST00000488386 ABHD14A-ACY1A0A1B0GW23 586 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 ESYT2A0FGR8 921 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 MBLAC1A4D2B0 266 aaPredicted RBP6.67□□□□□ -1.34
CDHR3-213ENST00000488386 TMEM150BA6NC51 233 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 KIF28PB7ZC32 967 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 IPO5O00410 1097 aaKnown RBP6.67□□□□□ -1.34
CDHR3-213ENST00000488386 CPLX1O14810 134 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 MSH4O15457 936 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 CTDNEP1O95476 244 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 AMHP03971 560 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 CYP3A4P08684 503 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 GNAT1P11488 350 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 FOSL1P15407 271 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 CD52P31358 61 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 CD97P48960 835 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 GATMP50440 423 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 AK2P54819 239 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 MRPS6P82932 125 aaKnown RBP6.67□□□□□ -1.34
CDHR3-213ENST00000488386 CLCQ05315 142 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 PAK2Q13177 524 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 NPY5RQ15761 445 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 UGCGQ16739 394 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 MSMPQ1L6U9 139 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 INF2Q27J81 1249 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 EARS2Q5JPH6 523 aaKnown RBP6.67□□□□□ -1.34
CDHR3-213ENST00000488386 FBXO47Q5MNV8 452 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 TMEM201Q5SNT2 666 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 MTHFD1LQ6UB35 978 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 ABHD15Q6UXT9 468 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 MCATQ8IVS2 390 aaKnown RBP6.67□□□□□ -1.34
CDHR3-213ENST00000488386 CKAP2LQ8IYA6 745 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 FBXL16Q8N461 479 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 TBCKQ8TEA7 893 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 CCDC12Q8WUD4 166 aaPredicted RBP6.67□□□□□ -1.34
CDHR3-213ENST00000488386 SEPT8Q92599 483 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 LENG9Q96B70 501 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 HEXIM2Q96MH2 286 aaKnown RBP6.67□□□□□ -1.34
CDHR3-213ENST00000488386 IFIH1Q9BYX4 1025 aaKnown RBP6.67□□□□□ -1.34
CDHR3-213ENST00000488386 ACBD3Q9H3P7 528 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 ZNF302Q9NR11 478 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 GABBR1Q9UBS5 961 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 PCDHB14Q9Y5E9 798 aa6.67□□□□□ -1.34
CDHR3-213ENST00000488386 COL4A6Q14031 1691 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 IGKV6D-21A0A0A0MT36 114 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 MAFGO15525 162 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 SLC37A4O43826 429 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 JAK2O60674 1132 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 DEXIO95424 95 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 PARNO95453 639 aaKnown RBP6.66□□□□□ -1.34
CDHR3-213ENST00000488386 VTNP04004 478 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 KLRC1P26715 233 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 GNA11P29992 359 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 KCNQ1P51787 676 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 CYP27A1Q02318 531 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 ST3GAL1Q11201 340 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 CPSF6Q16630 551 aaKnown RBP eCLIP6.66□□□□□ -1.34
CDHR3-213ENST00000488386 ME3Q16798 604 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 PAN2Q504Q3 1202 aaKnown RBP6.66□□□□□ -1.34
CDHR3-213ENST00000488386 MIS18BP1Q6P0N0 1132 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 TAF2Q6P1X5 1199 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 GK5Q6ZS86 529 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 PLPPR4Q7Z2D5 763 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 RTN4RL1Q86UN2 441 aaPredicted RBP6.66□□□□□ -1.34
CDHR3-213ENST00000488386 SLITRK4Q8IW52 837 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 BLIDQ8IZY5 108 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 LRRC71Q8N4P6 559 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 CCDC148Q8NFR7 591 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 GIMAP7Q8NHV1 300 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 TMEM40Q8WWA1 233 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 NKD1Q969G9 470 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 ZNF274Q96GC6 653 aaPredicted RBP6.66□□□□□ -1.34
CDHR3-213ENST00000488386 RAD9AQ99638 391 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 TM6SF1Q9BZW5 370 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 SLKQ9H2G2 1235 aaPredicted RBP6.66□□□□□ -1.34
CDHR3-213ENST00000488386 UNC45AQ9H3U1 944 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 THEGQ9P2T0 379 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 KLHL3Q9UH77 587 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 TRPV2Q9Y5S1 764 aa6.66□□□□□ -1.34
CDHR3-213ENST00000488386 KIAA1324LA8MWY0 1029 aaPredicted RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 CHURC1-FNTBB4DL54 471 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 ENPP3O14638 875 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 CYP26A1O43174 497 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 MGEA5O60502 916 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 PFKFB2O60825 505 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 C22orf31O95567 290 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 FDPSP14324 419 aaKnown RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 SPINK2P20155 84 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 FGFR4P22455 802 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 CIITAP33076 1130 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 CLCN3P51790 818 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 ERVK-21P61565 698 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 HTRA4P83105 476 aaPredicted RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 SETQ01105 290 aaPredicted RBP6.65□□□□□ -1.34
CDHR3-213ENST00000488386 DRP2Q13474 957 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 LRP8Q14114 963 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 KIZQ2M2Z5 673 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 LETM2Q2VYF4 491 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 FAM160B1Q5W0V3 765 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 SLC6A19Q695T7 634 aa6.65□□□□□ -1.34
CDHR3-213ENST00000488386 TSHZ1Q6ZSZ6 1077 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms