RNA–Protein interactions for RNA: ENST00000488186.5

C9orf3-219, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 1,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-219ENST00000488186 ITGB3P05106 788 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 ERCC5P28715 1186 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-219ENST00000488186 WNT7BP56706 349 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 RBP5P82980 135 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 BIRC3Q13489 604 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 TRPC3Q13507 836 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 SMC1AQ14683 1233 aaKnown RBP16.99■□□□□ 0.31
C9orf3-219ENST00000488186 USP41Q3LFD5 358 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 TCERG1LQ5VWI1 586 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 C9orf57Q5W0N0 161 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 TTI2Q6NXR4 508 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 FOXR2Q6PJQ5 311 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 DSTYKQ6XUX3 929 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 CEP57Q86XR8 500 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 MAFAQ8NHW3 353 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-219ENST00000488186 PARD3BQ8TEW8 1205 aa16.99■□□□□ 0.31
C9orf3-219ENST00000488186 BCL7CQ8WUZ0 217 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-219ENST00000488186 DUSP9Q99956 384 aaKnown RBP16.99■□□□□ 0.31
C9orf3-219ENST00000488186 METTL14Q9HCE5 456 aaKnown RBP16.99■□□□□ 0.31
C9orf3-219ENST00000488186 ARMCX3Q9UH62 379 aaPredicted RBP16.99■□□□□ 0.31
C9orf3-219ENST00000488186 BRWD1Q9NSI6 2320 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 LRRIQ3A6PVS8 624 aaPredicted RBP16.98■□□□□ 0.31
C9orf3-219ENST00000488186 C2CD2LO14523 706 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 SOD2P04179 222 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 URODP06132 367 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 PAX3P23760 479 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 DNAJB1P25685 340 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 PNPLA4P41247 253 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 BFSP1Q12934 665 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 TIGD5Q53EQ6 642 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 FAM171A1Q5VUB5 890 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 PLPP4Q5VZY2 271 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 OR5B17Q8NGF7 314 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 ZNF560Q96MR9 790 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 GPR62Q9BZJ7 368 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 NAT10Q9H0A0 1025 aaKnown RBP16.98■□□□□ 0.31
C9orf3-219ENST00000488186 MMRN2Q9H8L6 949 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 MRPL17Q9NRX2 175 aaKnown RBP16.98■□□□□ 0.31
C9orf3-219ENST00000488186 PRUNE2Q8WUY3 3088 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 EYSQ5T1H1 3165 aa16.98■□□□□ 0.31
C9orf3-219ENST00000488186 PLXNA4Q9HCM2 1894 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 ARHGEF37A1IGU5 675 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 PIRO00625 290 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 IKBKBO14920 756 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 CCDC192P0DO97 292 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 POLR2BP30876 1174 aaKnown RBP16.97■□□□□ 0.31
C9orf3-219ENST00000488186 BRCC3P46736 316 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 GLUD2P49448 558 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 TAF6P49848 677 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 ERVFC1P60507 584 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 TYRO3Q06418 890 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 MYO1EQ12965 1108 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 SV2CQ496J9 727 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 DCAF17Q5H9S7 520 aaPredicted RBP16.97■□□□□ 0.31
C9orf3-219ENST00000488186 TAS1R1Q7RTX1 841 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 TRAPPC11Q7Z392 1133 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 FRMD5Q7Z6J6 570 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 ZC3H3Q8IXZ2 948 aaKnown RBP16.97■□□□□ 0.31
C9orf3-219ENST00000488186 TMEM130Q8N3G9 435 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 C1orf127Q8N9H9 656 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 TTPALQ9BTX7 342 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 HERC2P3Q9BVR0 1158 aa16.97■□□□□ 0.31
C9orf3-219ENST00000488186 NSUN3Q9H649 340 aaKnown RBP16.97■□□□□ 0.31
C9orf3-219ENST00000488186 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-219ENST00000488186 ANO9A1A5B4 782 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 I3L4J1 428 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 NCK2O43639 380 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 CTSAP10619 480 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 LILRA4P59901 499 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 DLG4P78352 724 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 ENPEPQ07075 957 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 PDXDC1Q6P996 788 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-219ENST00000488186 FAM114A1Q8IWE2 563 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 C3orf58Q8NDZ4 430 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 APPL2Q8NEU8 664 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 PPM1EQ8WY54 764 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 RIN2Q8WYP3 895 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-219ENST00000488186 FAM84AQ96KN4 292 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 EMILIN2Q9BXX0 1053 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 ZBP1Q9H171 429 aa16.96■□□□□ 0.31
C9orf3-219ENST00000488186 MAGEC2Q9UBF1 373 aaPredicted RBP16.96■□□□□ 0.31
C9orf3-219ENST00000488186 ATG2AQ2TAZ0 1938 aa16.96■□□□□ 0.3
C9orf3-219ENST00000488186 PTPRJQ12913 1337 aa16.96■□□□□ 0.3
C9orf3-219ENST00000488186 SYCE3A1L190 88 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 FSD2A1L4K1 749 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 PPEF2O14830 753 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 TRIM49P0CI25 452 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 TRIM49CP0CI26 452 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 IRS1P35568 1242 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 CREMQ03060 361 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 CAMK1Q14012 370 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 COL19A1Q14993 1142 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 CCDC85BQ15834 202 aaPredicted RBP16.95■□□□□ 0.3
C9orf3-219ENST00000488186 METTL23Q86XA0 190 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 LRRC52Q8N7C0 313 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 MRPL43Q8N983 215 aaKnown RBP16.95■□□□□ 0.3
C9orf3-219ENST00000488186 PLEKHO2Q8TD55 490 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 AUTS2Q8WXX7 1259 aa16.95■□□□□ 0.3
C9orf3-219ENST00000488186 ZNF516Q92618 1163 aa16.95■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms