RNA–Protein interactions for RNA: ENST00000488035.5

R3HDM1-219, Transcript of R3H domain containing 1, humanhuman

TSL 3

Gene R3HDM1, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-219ENST00000488035 CLPTM1LQ96KA5 538 aa3.71□□□□□ -1.82
R3HDM1-219ENST00000488035 UHRF1Q96T88 793 aaPredicted RBP3.71□□□□□ -1.82
R3HDM1-219ENST00000488035 MAP3K14Q99558 947 aa3.71□□□□□ -1.82
R3HDM1-219ENST00000488035 MYOCQ99972 504 aa3.71□□□□□ -1.82
R3HDM1-219ENST00000488035 VRK1Q99986 396 aaPredicted RBP3.71□□□□□ -1.82
R3HDM1-219ENST00000488035 NIPSNAP3AQ9UFN0 247 aaPredicted RBP3.71□□□□□ -1.82
R3HDM1-219ENST00000488035 SORCS3Q9UPU3 1222 aa3.71□□□□□ -1.82
R3HDM1-219ENST00000488035 RUVBL1Q9Y265 456 aaKnown RBP3.71□□□□□ -1.82
R3HDM1-219ENST00000488035 GPR32O75388 356 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 SBK3P0C264 359 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 GNAT2P19087 354 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 CLK3P49761 638 aaKnown RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 ELLP55199 621 aaPredicted RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 NPEPPSP55786 919 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 APBA1Q02410 837 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 LLGL1Q15334 1064 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 KHDC1Q4VXA5 237 aaKnown RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 C1QL3Q5VWW1 255 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 AFMIDQ63HM1 303 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 SWSAP1Q6NVH7 229 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 FBXO42Q6P3S6 717 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 Q6YL49 198 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 ZNF572Q7Z3I7 529 aaPredicted RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 DGKHQ86XP1 1220 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 DRC7Q8IY82 874 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 CAMKK1Q8N5S9 505 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 RGMAQ96B86 450 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 MYEOVQ96EZ4 313 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 ZNF512Q96ME7 567 aaPredicted RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 NT5C1BQ96P26 610 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 CDC5LQ99459 802 aaKnown RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 CGRRF1Q99675 332 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 LSM14BQ9BX40 385 aaKnown RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 SENP6Q9GZR1 1112 aaPredicted RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 R3HDMLQ9H3Y0 253 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 LANCL2Q9NS86 450 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 TDP1Q9NUW8 608 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 SLC23A1Q9UHI7 598 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 NR2E3Q9Y5X4 410 aa3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 CFAP20Q9Y6A4 193 aaKnown RBP3.7□□□□□ -1.82
R3HDM1-219ENST00000488035 GOLGA6CA6NDK9 693 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 GOLGA6BA6NDN3 693 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 NRP1O14786 923 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 SGTAO43765 313 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 CTNND1O60716 968 aaKnown RBP3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 DTNBO60941 627 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 TUSC2O75896 110 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 UBXN7O94888 489 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 SCAF4O95104 1147 aaKnown RBP3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 C1RP00736 705 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 GASTP01350 101 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 FTLP02792 175 aaPredicted RBP3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 GOLGA6DP0CG33 693 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 DDCP20711 480 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 GZMKP49863 264 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 TLE1Q04724 770 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 NOGQ13253 232 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 MRPL49Q13405 166 aaKnown RBP3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 SNAPC2Q13487 334 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 GBX1Q14549 363 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 CCDC181Q5TID7 509 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 FAM180AQ6UWF9 173 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 APBB1IPQ7Z5R6 666 aaPredicted RBP3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 DENND1CQ8IV53 801 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 LCORLQ8N3X6 602 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 CELF5Q8N6W0 485 aaKnown RBP3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 C1GALT1C1Q96EU7 318 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 IL17RAQ96F46 866 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 B3GNT5Q9BYG0 378 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 KRTAP1-5Q9BYS1 174 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 CPEB1Q9BZB8 566 aaKnown RBP3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 MANSC1Q9H8J5 431 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 RSAD1Q9HA92 442 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 SLC52A1Q9NWF4 448 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 GOLGA6AQ9NYA3 693 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 PCDHA3Q9Y5H8 950 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 FRMPD2Q68DX3 1309 aaPredicted RBP3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 PNPLA7Q6ZV29 1317 aa3.69□□□□□ -1.82
R3HDM1-219ENST00000488035 CXorf49A8MYA2 514 aaPredicted RBP3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 H3BML4 177 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 ERC2O15083 957 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 HOXA3O43365 443 aaPredicted RBP3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 PRC1O43663 620 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 U2AF1L5P0DN76 240 aaPredicted RBP3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 RAP2AP10114 183 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 MALP21145 153 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 HTR1BP28222 390 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 SLC6A4P31645 630 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 ZEB1P37275 1124 aaPredicted RBP3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 FLT3LGP49771 235 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 HK3P52790 923 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 PTTG1IPP53801 180 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 U2AF1Q01081 240 aaKnown RBP eCLIP3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 SP140Q13342 867 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 PRR16Q569H4 304 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 FAM47AQ5JRC9 791 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 SLC4A10Q6U841 1118 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 TTC7BQ86TV6 843 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 RSPH3Q86UC2 560 aa3.68□□□□□ -1.82
R3HDM1-219ENST00000488035 COQ10AQ96MF6 247 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms